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Epileptic seizure detection using EEG signals and extreme gradient boosting

The problem of automated seizure detection is treated using clinical electroencephalograms (EEG) and machine learning algorithms on the Temple University Hospital EEG Seizure Corpus (TUSZ). Performances on this complex data set are still not encountering expectations. The purpose of this work is to...

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Autores principales: Vanabelle, Paul, De Handschutter, Pierre, El Tahry, Riëm, Benjelloun, Mohammed, Boukhebouze, Mohamed
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Editorial Department of Journal of Biomedical Research 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7324276/
https://www.ncbi.nlm.nih.gov/pubmed/32561701
http://dx.doi.org/10.7555/JBR.33.20190016
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author Vanabelle, Paul
De Handschutter, Pierre
El Tahry, Riëm
Benjelloun, Mohammed
Boukhebouze, Mohamed
author_facet Vanabelle, Paul
De Handschutter, Pierre
El Tahry, Riëm
Benjelloun, Mohammed
Boukhebouze, Mohamed
author_sort Vanabelle, Paul
collection PubMed
description The problem of automated seizure detection is treated using clinical electroencephalograms (EEG) and machine learning algorithms on the Temple University Hospital EEG Seizure Corpus (TUSZ). Performances on this complex data set are still not encountering expectations. The purpose of this work is to determine to what extent the use of larger amount of data can help to improve the performances. Two methods are explored: a standard partitioning on a recent and larger version of the TUSZ, and a leave-one-out approach used to increase the amount of data for the training set. XGBoost, a fast implementation of the gradient boosting classifier, is the ideal algorithm for these tasks. The performances obtained are in the range of what is reported until now in the literature with deep learning models. We give interpretation to our results by identifying the most relevant features and analyzing performances by seizure types. We show that generalized seizures tend to be far better predicted than focal ones. We also notice that some EEG channels and features are more important than others to distinguish seizure from background.
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spelling pubmed-73242762020-07-06 Epileptic seizure detection using EEG signals and extreme gradient boosting Vanabelle, Paul De Handschutter, Pierre El Tahry, Riëm Benjelloun, Mohammed Boukhebouze, Mohamed J Biomed Res Original Article The problem of automated seizure detection is treated using clinical electroencephalograms (EEG) and machine learning algorithms on the Temple University Hospital EEG Seizure Corpus (TUSZ). Performances on this complex data set are still not encountering expectations. The purpose of this work is to determine to what extent the use of larger amount of data can help to improve the performances. Two methods are explored: a standard partitioning on a recent and larger version of the TUSZ, and a leave-one-out approach used to increase the amount of data for the training set. XGBoost, a fast implementation of the gradient boosting classifier, is the ideal algorithm for these tasks. The performances obtained are in the range of what is reported until now in the literature with deep learning models. We give interpretation to our results by identifying the most relevant features and analyzing performances by seizure types. We show that generalized seizures tend to be far better predicted than focal ones. We also notice that some EEG channels and features are more important than others to distinguish seizure from background. Editorial Department of Journal of Biomedical Research 2020-05 /pmc/articles/PMC7324276/ /pubmed/32561701 http://dx.doi.org/10.7555/JBR.33.20190016 Text en Copyright and License information: Journal of Biomedical Research, CAS Springer-Verlag Berlin Heidelberg 2020 http://creativecommons.org/licenses/by-nc-sa/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-Share Alike 4.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/
spellingShingle Original Article
Vanabelle, Paul
De Handschutter, Pierre
El Tahry, Riëm
Benjelloun, Mohammed
Boukhebouze, Mohamed
Epileptic seizure detection using EEG signals and extreme gradient boosting
title Epileptic seizure detection using EEG signals and extreme gradient boosting
title_full Epileptic seizure detection using EEG signals and extreme gradient boosting
title_fullStr Epileptic seizure detection using EEG signals and extreme gradient boosting
title_full_unstemmed Epileptic seizure detection using EEG signals and extreme gradient boosting
title_short Epileptic seizure detection using EEG signals and extreme gradient boosting
title_sort epileptic seizure detection using eeg signals and extreme gradient boosting
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7324276/
https://www.ncbi.nlm.nih.gov/pubmed/32561701
http://dx.doi.org/10.7555/JBR.33.20190016
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