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Epileptic seizure detection using EEG signals and extreme gradient boosting
The problem of automated seizure detection is treated using clinical electroencephalograms (EEG) and machine learning algorithms on the Temple University Hospital EEG Seizure Corpus (TUSZ). Performances on this complex data set are still not encountering expectations. The purpose of this work is to...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Editorial Department of Journal of Biomedical Research
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7324276/ https://www.ncbi.nlm.nih.gov/pubmed/32561701 http://dx.doi.org/10.7555/JBR.33.20190016 |
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author | Vanabelle, Paul De Handschutter, Pierre El Tahry, Riëm Benjelloun, Mohammed Boukhebouze, Mohamed |
author_facet | Vanabelle, Paul De Handschutter, Pierre El Tahry, Riëm Benjelloun, Mohammed Boukhebouze, Mohamed |
author_sort | Vanabelle, Paul |
collection | PubMed |
description | The problem of automated seizure detection is treated using clinical electroencephalograms (EEG) and machine learning algorithms on the Temple University Hospital EEG Seizure Corpus (TUSZ). Performances on this complex data set are still not encountering expectations. The purpose of this work is to determine to what extent the use of larger amount of data can help to improve the performances. Two methods are explored: a standard partitioning on a recent and larger version of the TUSZ, and a leave-one-out approach used to increase the amount of data for the training set. XGBoost, a fast implementation of the gradient boosting classifier, is the ideal algorithm for these tasks. The performances obtained are in the range of what is reported until now in the literature with deep learning models. We give interpretation to our results by identifying the most relevant features and analyzing performances by seizure types. We show that generalized seizures tend to be far better predicted than focal ones. We also notice that some EEG channels and features are more important than others to distinguish seizure from background. |
format | Online Article Text |
id | pubmed-7324276 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Editorial Department of Journal of Biomedical Research |
record_format | MEDLINE/PubMed |
spelling | pubmed-73242762020-07-06 Epileptic seizure detection using EEG signals and extreme gradient boosting Vanabelle, Paul De Handschutter, Pierre El Tahry, Riëm Benjelloun, Mohammed Boukhebouze, Mohamed J Biomed Res Original Article The problem of automated seizure detection is treated using clinical electroencephalograms (EEG) and machine learning algorithms on the Temple University Hospital EEG Seizure Corpus (TUSZ). Performances on this complex data set are still not encountering expectations. The purpose of this work is to determine to what extent the use of larger amount of data can help to improve the performances. Two methods are explored: a standard partitioning on a recent and larger version of the TUSZ, and a leave-one-out approach used to increase the amount of data for the training set. XGBoost, a fast implementation of the gradient boosting classifier, is the ideal algorithm for these tasks. The performances obtained are in the range of what is reported until now in the literature with deep learning models. We give interpretation to our results by identifying the most relevant features and analyzing performances by seizure types. We show that generalized seizures tend to be far better predicted than focal ones. We also notice that some EEG channels and features are more important than others to distinguish seizure from background. Editorial Department of Journal of Biomedical Research 2020-05 /pmc/articles/PMC7324276/ /pubmed/32561701 http://dx.doi.org/10.7555/JBR.33.20190016 Text en Copyright and License information: Journal of Biomedical Research, CAS Springer-Verlag Berlin Heidelberg 2020 http://creativecommons.org/licenses/by-nc-sa/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-Share Alike 4.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/ |
spellingShingle | Original Article Vanabelle, Paul De Handschutter, Pierre El Tahry, Riëm Benjelloun, Mohammed Boukhebouze, Mohamed Epileptic seizure detection using EEG signals and extreme gradient boosting |
title | Epileptic seizure detection using EEG signals and extreme gradient boosting |
title_full | Epileptic seizure detection using EEG signals and extreme gradient boosting |
title_fullStr | Epileptic seizure detection using EEG signals and extreme gradient boosting |
title_full_unstemmed | Epileptic seizure detection using EEG signals and extreme gradient boosting |
title_short | Epileptic seizure detection using EEG signals and extreme gradient boosting |
title_sort | epileptic seizure detection using eeg signals and extreme gradient boosting |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7324276/ https://www.ncbi.nlm.nih.gov/pubmed/32561701 http://dx.doi.org/10.7555/JBR.33.20190016 |
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