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Test sensitivity is secondary to frequency and turnaround time for COVID-19 surveillance
The COVID-19 pandemic has created a public health crisis. Because SARS-CoV-2 can spread from individuals with pre-symptomatic, symptomatic, and asymptomatic infections, the re-opening of societies and the control of virus spread will be facilitated by robust surveillance, for which virus testing wil...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325181/ https://www.ncbi.nlm.nih.gov/pubmed/32607516 http://dx.doi.org/10.1101/2020.06.22.20136309 |
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author | Larremore, Daniel B. Wilder, Bryan Lester, Evan Shehata, Soraya Burke, James M. Hay, James A. Milind, Tambe Mina, Michael J. Parker, Roy |
author_facet | Larremore, Daniel B. Wilder, Bryan Lester, Evan Shehata, Soraya Burke, James M. Hay, James A. Milind, Tambe Mina, Michael J. Parker, Roy |
author_sort | Larremore, Daniel B. |
collection | PubMed |
description | The COVID-19 pandemic has created a public health crisis. Because SARS-CoV-2 can spread from individuals with pre-symptomatic, symptomatic, and asymptomatic infections, the re-opening of societies and the control of virus spread will be facilitated by robust surveillance, for which virus testing will often be central. After infection, individuals undergo a period of incubation during which viral titers are usually too low to detect, followed by an exponential viral growth, leading to a peak viral load and infectiousness, and ending with declining viral levels and clearance. Given the pattern of viral load kinetics, we model surveillance effectiveness considering test sensitivities, frequency, and sample-to-answer reporting time. These results demonstrate that effective surveillance depends largely on frequency of testing and the speed of reporting, and is only marginally improved by high test sensitivity. We therefore conclude that surveillance should prioritize accessibility, frequency, and sample-to-answer time; analytical limits of detection should be secondary. |
format | Online Article Text |
id | pubmed-7325181 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Cold Spring Harbor Laboratory |
record_format | MEDLINE/PubMed |
spelling | pubmed-73251812020-06-30 Test sensitivity is secondary to frequency and turnaround time for COVID-19 surveillance Larremore, Daniel B. Wilder, Bryan Lester, Evan Shehata, Soraya Burke, James M. Hay, James A. Milind, Tambe Mina, Michael J. Parker, Roy medRxiv Article The COVID-19 pandemic has created a public health crisis. Because SARS-CoV-2 can spread from individuals with pre-symptomatic, symptomatic, and asymptomatic infections, the re-opening of societies and the control of virus spread will be facilitated by robust surveillance, for which virus testing will often be central. After infection, individuals undergo a period of incubation during which viral titers are usually too low to detect, followed by an exponential viral growth, leading to a peak viral load and infectiousness, and ending with declining viral levels and clearance. Given the pattern of viral load kinetics, we model surveillance effectiveness considering test sensitivities, frequency, and sample-to-answer reporting time. These results demonstrate that effective surveillance depends largely on frequency of testing and the speed of reporting, and is only marginally improved by high test sensitivity. We therefore conclude that surveillance should prioritize accessibility, frequency, and sample-to-answer time; analytical limits of detection should be secondary. Cold Spring Harbor Laboratory 2020-09-08 /pmc/articles/PMC7325181/ /pubmed/32607516 http://dx.doi.org/10.1101/2020.06.22.20136309 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator. |
spellingShingle | Article Larremore, Daniel B. Wilder, Bryan Lester, Evan Shehata, Soraya Burke, James M. Hay, James A. Milind, Tambe Mina, Michael J. Parker, Roy Test sensitivity is secondary to frequency and turnaround time for COVID-19 surveillance |
title | Test sensitivity is secondary to frequency and turnaround time for COVID-19 surveillance |
title_full | Test sensitivity is secondary to frequency and turnaround time for COVID-19 surveillance |
title_fullStr | Test sensitivity is secondary to frequency and turnaround time for COVID-19 surveillance |
title_full_unstemmed | Test sensitivity is secondary to frequency and turnaround time for COVID-19 surveillance |
title_short | Test sensitivity is secondary to frequency and turnaround time for COVID-19 surveillance |
title_sort | test sensitivity is secondary to frequency and turnaround time for covid-19 surveillance |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325181/ https://www.ncbi.nlm.nih.gov/pubmed/32607516 http://dx.doi.org/10.1101/2020.06.22.20136309 |
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