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A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota
High-latitude environments are warming, leading to changes in biological diversity patterns of taxa. Oomycota are a group of fungal-like organisms that comprise a major clade of eukaryotic life and are parasites of fish, agricultural crops, and algae. The diversity, functionality, and distribution o...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325649/ https://www.ncbi.nlm.nih.gov/pubmed/32647615 http://dx.doi.org/10.1186/s43008-019-0006-6 |
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author | Hassett, Brandon T. Thines, Marco Buaya, Anthony Ploch, Sebastian Gradinger, R. |
author_facet | Hassett, Brandon T. Thines, Marco Buaya, Anthony Ploch, Sebastian Gradinger, R. |
author_sort | Hassett, Brandon T. |
collection | PubMed |
description | High-latitude environments are warming, leading to changes in biological diversity patterns of taxa. Oomycota are a group of fungal-like organisms that comprise a major clade of eukaryotic life and are parasites of fish, agricultural crops, and algae. The diversity, functionality, and distribution of these organisms are essentially unknown in the Arctic marine environment. Thus, it was our aim to conduct a first screening, using a functional gene assay and high-throughput sequencing of two gene regions within the 18S rRNA locus to examine the diversity, richness, and phylogeny of marine Oomycota within Arctic sediment, seawater, and sea ice. We detected Oomycota at every site sampled and identified regionally localized taxa, as well as taxa that existed in both Alaska and Svalbard. While the recently described diatom parasite Miracula helgolandica made up about 50% of the oomycete reads found, many lineages were observed that could not be assigned to known species, including several that clustered with another recently described diatom parasite, Olpidiopsis drebesii. Across the Arctic, Oomycota comprised a maximum of 6% of the entire eukaryotic microbial community in Barrow, Alaska May sediment and 10% in sea ice near the Svalbard archipelago. We found Arctic marine Oomycota encode numerous genes involved in parasitism and carbon cycling processes. Ultimately, these data suggest that Arctic marine Oomycota are a reservoir of uncharacterized biodiversity, the majority of which are probably parasites of diatoms, while others might cryptically cycle carbon or interface other unknown ecological processes. As the Arctic continues to warm, lower-latitude Oomycota might migrate into the Arctic Ocean and parasitize non-coevolved hosts, leading to incalculable shifts in the primary producer community. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s43008-019-0006-6) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-7325649 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-73256492020-07-08 A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota Hassett, Brandon T. Thines, Marco Buaya, Anthony Ploch, Sebastian Gradinger, R. IMA Fungus Research High-latitude environments are warming, leading to changes in biological diversity patterns of taxa. Oomycota are a group of fungal-like organisms that comprise a major clade of eukaryotic life and are parasites of fish, agricultural crops, and algae. The diversity, functionality, and distribution of these organisms are essentially unknown in the Arctic marine environment. Thus, it was our aim to conduct a first screening, using a functional gene assay and high-throughput sequencing of two gene regions within the 18S rRNA locus to examine the diversity, richness, and phylogeny of marine Oomycota within Arctic sediment, seawater, and sea ice. We detected Oomycota at every site sampled and identified regionally localized taxa, as well as taxa that existed in both Alaska and Svalbard. While the recently described diatom parasite Miracula helgolandica made up about 50% of the oomycete reads found, many lineages were observed that could not be assigned to known species, including several that clustered with another recently described diatom parasite, Olpidiopsis drebesii. Across the Arctic, Oomycota comprised a maximum of 6% of the entire eukaryotic microbial community in Barrow, Alaska May sediment and 10% in sea ice near the Svalbard archipelago. We found Arctic marine Oomycota encode numerous genes involved in parasitism and carbon cycling processes. Ultimately, these data suggest that Arctic marine Oomycota are a reservoir of uncharacterized biodiversity, the majority of which are probably parasites of diatoms, while others might cryptically cycle carbon or interface other unknown ecological processes. As the Arctic continues to warm, lower-latitude Oomycota might migrate into the Arctic Ocean and parasitize non-coevolved hosts, leading to incalculable shifts in the primary producer community. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s43008-019-0006-6) contains supplementary material, which is available to authorized users. BioMed Central 2019-06-20 /pmc/articles/PMC7325649/ /pubmed/32647615 http://dx.doi.org/10.1186/s43008-019-0006-6 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Hassett, Brandon T. Thines, Marco Buaya, Anthony Ploch, Sebastian Gradinger, R. A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota |
title | A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota |
title_full | A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota |
title_fullStr | A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota |
title_full_unstemmed | A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota |
title_short | A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota |
title_sort | glimpse into the biogeography, seasonality, and ecological functions of arctic marine oomycota |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325649/ https://www.ncbi.nlm.nih.gov/pubmed/32647615 http://dx.doi.org/10.1186/s43008-019-0006-6 |
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