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Rapid Detection to Differentiate Hypervirulent Klebsiella pneumoniae (hvKp) From Classical K. pneumoniae by Identifying peg-344 With Loop-Mediated Isothermal Amplication (LAMP)

OBJECTIVES: To establish a rapid molecular diagnostics of hvKp using the peg-344 loop-mediated isothermal amplification technique (LAMP). METHODS: In all, 28 K. pneumoniae strains isolated from the blood of patients were used for the peg-344 LAMP. K. pneumoniae NTUH-K2044 and K. pneumoniae ATCC70060...

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Autores principales: Liao, Wenjian, Long, Dan, Huang, Qisen, Wei, Dandan, Liu, Xiaobing, Wan, Lagen, Feng, Yuling, Zhang, Wei, Liu, Yang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325879/
https://www.ncbi.nlm.nih.gov/pubmed/32655515
http://dx.doi.org/10.3389/fmicb.2020.01189
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author Liao, Wenjian
Long, Dan
Huang, Qisen
Wei, Dandan
Liu, Xiaobing
Wan, Lagen
Feng, Yuling
Zhang, Wei
Liu, Yang
author_facet Liao, Wenjian
Long, Dan
Huang, Qisen
Wei, Dandan
Liu, Xiaobing
Wan, Lagen
Feng, Yuling
Zhang, Wei
Liu, Yang
author_sort Liao, Wenjian
collection PubMed
description OBJECTIVES: To establish a rapid molecular diagnostics of hvKp using the peg-344 loop-mediated isothermal amplification technique (LAMP). METHODS: In all, 28 K. pneumoniae strains isolated from the blood of patients were used for the peg-344 LAMP. K. pneumoniae NTUH-K2044 and K. pneumoniae ATCC700603 were used as positive control and negative control, respectively. For comparison, all the results were detected in a polymerase chain reaction (PCR), which was considered the gold standard for the detection of the gene. Mouse lethality assay, and Serum killing assay were also used to determine the virulence phenotype of K. pneumoniae. RESULTS: We determined the specificity and sensitivity of the primers for peg-344 detection in the LAMP reactions. This LAMP assay was able to specifically differentiate hvKp from classical K. pneumoniae (cKp) at 65°C, which was 100-fold more sensitive than a PCR assay for peg-344 detection. The virulence phenotype of K. pneumoniae detected by LAMP was as precise as by Mouse lethality assay and Serum killing assay. CONCLUSION: The LAMP assay is easy to perform and rapid. Therefore, it can be routinely applied to differentiate hvKp from cKp in the clinical laboratory.
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spelling pubmed-73258792020-07-09 Rapid Detection to Differentiate Hypervirulent Klebsiella pneumoniae (hvKp) From Classical K. pneumoniae by Identifying peg-344 With Loop-Mediated Isothermal Amplication (LAMP) Liao, Wenjian Long, Dan Huang, Qisen Wei, Dandan Liu, Xiaobing Wan, Lagen Feng, Yuling Zhang, Wei Liu, Yang Front Microbiol Microbiology OBJECTIVES: To establish a rapid molecular diagnostics of hvKp using the peg-344 loop-mediated isothermal amplification technique (LAMP). METHODS: In all, 28 K. pneumoniae strains isolated from the blood of patients were used for the peg-344 LAMP. K. pneumoniae NTUH-K2044 and K. pneumoniae ATCC700603 were used as positive control and negative control, respectively. For comparison, all the results were detected in a polymerase chain reaction (PCR), which was considered the gold standard for the detection of the gene. Mouse lethality assay, and Serum killing assay were also used to determine the virulence phenotype of K. pneumoniae. RESULTS: We determined the specificity and sensitivity of the primers for peg-344 detection in the LAMP reactions. This LAMP assay was able to specifically differentiate hvKp from classical K. pneumoniae (cKp) at 65°C, which was 100-fold more sensitive than a PCR assay for peg-344 detection. The virulence phenotype of K. pneumoniae detected by LAMP was as precise as by Mouse lethality assay and Serum killing assay. CONCLUSION: The LAMP assay is easy to perform and rapid. Therefore, it can be routinely applied to differentiate hvKp from cKp in the clinical laboratory. Frontiers Media S.A. 2020-06-04 /pmc/articles/PMC7325879/ /pubmed/32655515 http://dx.doi.org/10.3389/fmicb.2020.01189 Text en Copyright © 2020 Liao, Long, Huang, Wei, Liu, Wan, Feng, Zhang and Liu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Liao, Wenjian
Long, Dan
Huang, Qisen
Wei, Dandan
Liu, Xiaobing
Wan, Lagen
Feng, Yuling
Zhang, Wei
Liu, Yang
Rapid Detection to Differentiate Hypervirulent Klebsiella pneumoniae (hvKp) From Classical K. pneumoniae by Identifying peg-344 With Loop-Mediated Isothermal Amplication (LAMP)
title Rapid Detection to Differentiate Hypervirulent Klebsiella pneumoniae (hvKp) From Classical K. pneumoniae by Identifying peg-344 With Loop-Mediated Isothermal Amplication (LAMP)
title_full Rapid Detection to Differentiate Hypervirulent Klebsiella pneumoniae (hvKp) From Classical K. pneumoniae by Identifying peg-344 With Loop-Mediated Isothermal Amplication (LAMP)
title_fullStr Rapid Detection to Differentiate Hypervirulent Klebsiella pneumoniae (hvKp) From Classical K. pneumoniae by Identifying peg-344 With Loop-Mediated Isothermal Amplication (LAMP)
title_full_unstemmed Rapid Detection to Differentiate Hypervirulent Klebsiella pneumoniae (hvKp) From Classical K. pneumoniae by Identifying peg-344 With Loop-Mediated Isothermal Amplication (LAMP)
title_short Rapid Detection to Differentiate Hypervirulent Klebsiella pneumoniae (hvKp) From Classical K. pneumoniae by Identifying peg-344 With Loop-Mediated Isothermal Amplication (LAMP)
title_sort rapid detection to differentiate hypervirulent klebsiella pneumoniae (hvkp) from classical k. pneumoniae by identifying peg-344 with loop-mediated isothermal amplication (lamp)
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325879/
https://www.ncbi.nlm.nih.gov/pubmed/32655515
http://dx.doi.org/10.3389/fmicb.2020.01189
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