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From Folk Taxonomy to Species Confirmation of Acorus (Acoraceae): Evidences Based on Phylogenetic and Metabolomic Analyses

Plants in Acorus have been used as herbal medicine by various linguistic groups for thousands of years. Arguments of taxonomy of Acorus among scientists resulted in confusions and misuses of Acorus plants. The present study used different methods to investigate the classification of the genus, based...

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Autores principales: Cheng, Zhuo, Shu, Hang, Zhang, Shuang, Luo, Binsheng, Gu, Ronghui, Zhang, Ruifei, Ji, Yuanyuan, Li, Feifei, Long, Chunlin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7327505/
https://www.ncbi.nlm.nih.gov/pubmed/32670345
http://dx.doi.org/10.3389/fpls.2020.00965
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author Cheng, Zhuo
Shu, Hang
Zhang, Shuang
Luo, Binsheng
Gu, Ronghui
Zhang, Ruifei
Ji, Yuanyuan
Li, Feifei
Long, Chunlin
author_facet Cheng, Zhuo
Shu, Hang
Zhang, Shuang
Luo, Binsheng
Gu, Ronghui
Zhang, Ruifei
Ji, Yuanyuan
Li, Feifei
Long, Chunlin
author_sort Cheng, Zhuo
collection PubMed
description Plants in Acorus have been used as herbal medicine by various linguistic groups for thousands of years. Arguments of taxonomy of Acorus among scientists resulted in confusions and misuses of Acorus plants. The present study used different methods to investigate the classification of the genus, based on folk taxonomy. The relationships among Acorus species were revealed through phylogenetic analyses by constructing the Maximum Likelihood and Bayesian phylogenetic analyses based on sequences of two chloroplast regions (trnL-trnF and rbcL). All samples named with two so-called synonyms, Acorus macrospadiceus (Yamam.) F. N. Wei and Y. K. Li and Acorus tatarinowii Schott collected from different habitats, were clustered into separate groups, which revealed that they represented two independent species. Multivariate statistical analysis of metabolites from different Acorus populations were carried out based on UPLC-QTOF-MS data. Three independent analysis, principal component analysis, heat-map analysis, and hierarchical cluster analysis, showed that A. macrospadiceus and A. tatarinowii are different from two recognized species in the genus, A. calamus L. and A. gramineus Aiton. The results of phylogenetics and chemotaxonomy, together with morphological and ecological evidences, were consistent with traditional knowledge of local people related to Acorus taxa, which proved the significance of parataxonomy. Multiple evidences including morphological, ecological, folk taxonomic, phylogenetic, and chemical taxonomic results suggested that there are four species in the genus Acorus.
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spelling pubmed-73275052020-07-14 From Folk Taxonomy to Species Confirmation of Acorus (Acoraceae): Evidences Based on Phylogenetic and Metabolomic Analyses Cheng, Zhuo Shu, Hang Zhang, Shuang Luo, Binsheng Gu, Ronghui Zhang, Ruifei Ji, Yuanyuan Li, Feifei Long, Chunlin Front Plant Sci Plant Science Plants in Acorus have been used as herbal medicine by various linguistic groups for thousands of years. Arguments of taxonomy of Acorus among scientists resulted in confusions and misuses of Acorus plants. The present study used different methods to investigate the classification of the genus, based on folk taxonomy. The relationships among Acorus species were revealed through phylogenetic analyses by constructing the Maximum Likelihood and Bayesian phylogenetic analyses based on sequences of two chloroplast regions (trnL-trnF and rbcL). All samples named with two so-called synonyms, Acorus macrospadiceus (Yamam.) F. N. Wei and Y. K. Li and Acorus tatarinowii Schott collected from different habitats, were clustered into separate groups, which revealed that they represented two independent species. Multivariate statistical analysis of metabolites from different Acorus populations were carried out based on UPLC-QTOF-MS data. Three independent analysis, principal component analysis, heat-map analysis, and hierarchical cluster analysis, showed that A. macrospadiceus and A. tatarinowii are different from two recognized species in the genus, A. calamus L. and A. gramineus Aiton. The results of phylogenetics and chemotaxonomy, together with morphological and ecological evidences, were consistent with traditional knowledge of local people related to Acorus taxa, which proved the significance of parataxonomy. Multiple evidences including morphological, ecological, folk taxonomic, phylogenetic, and chemical taxonomic results suggested that there are four species in the genus Acorus. Frontiers Media S.A. 2020-06-24 /pmc/articles/PMC7327505/ /pubmed/32670345 http://dx.doi.org/10.3389/fpls.2020.00965 Text en Copyright © 2020 Cheng, Shu, Zhang, Luo, Gu, Zhang, Ji, Li and Long http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Cheng, Zhuo
Shu, Hang
Zhang, Shuang
Luo, Binsheng
Gu, Ronghui
Zhang, Ruifei
Ji, Yuanyuan
Li, Feifei
Long, Chunlin
From Folk Taxonomy to Species Confirmation of Acorus (Acoraceae): Evidences Based on Phylogenetic and Metabolomic Analyses
title From Folk Taxonomy to Species Confirmation of Acorus (Acoraceae): Evidences Based on Phylogenetic and Metabolomic Analyses
title_full From Folk Taxonomy to Species Confirmation of Acorus (Acoraceae): Evidences Based on Phylogenetic and Metabolomic Analyses
title_fullStr From Folk Taxonomy to Species Confirmation of Acorus (Acoraceae): Evidences Based on Phylogenetic and Metabolomic Analyses
title_full_unstemmed From Folk Taxonomy to Species Confirmation of Acorus (Acoraceae): Evidences Based on Phylogenetic and Metabolomic Analyses
title_short From Folk Taxonomy to Species Confirmation of Acorus (Acoraceae): Evidences Based on Phylogenetic and Metabolomic Analyses
title_sort from folk taxonomy to species confirmation of acorus (acoraceae): evidences based on phylogenetic and metabolomic analyses
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7327505/
https://www.ncbi.nlm.nih.gov/pubmed/32670345
http://dx.doi.org/10.3389/fpls.2020.00965
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