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The Blood Gene Expression Signature for Kawasaki Disease in Children Identified with Advanced Feature Selection Methods
Kawasaki disease (KD) is an acute vasculitis, accompanied by coronary artery aneurysm, coronary artery dilatation, arrhythmia, and other serious cardiovascular diseases. So far, the etiology of KD is unclear; it is necessary to study the molecular mechanism and related factors of KD. In this study,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7327570/ https://www.ncbi.nlm.nih.gov/pubmed/32685506 http://dx.doi.org/10.1155/2020/6062436 |
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author | Hu, Bing Li, Yun Wang, Guilian Zhang, Yanqing |
author_facet | Hu, Bing Li, Yun Wang, Guilian Zhang, Yanqing |
author_sort | Hu, Bing |
collection | PubMed |
description | Kawasaki disease (KD) is an acute vasculitis, accompanied by coronary artery aneurysm, coronary artery dilatation, arrhythmia, and other serious cardiovascular diseases. So far, the etiology of KD is unclear; it is necessary to study the molecular mechanism and related factors of KD. In this study, we analyzed the expression profiles of 75 DB (identifying bacteria), 122 DV (identifying virus), 71 HC (healthy control), and 311 KD (Kawasaki disease) samples. 332 key genes related to KD and pathogen infections were identified using a combination of advanced feature selection methods: (1) Boruta, (2) Monte-Carlo Feature Selection (MCFS), and (3) Incremental Feature Selection (IFS). The number of signature genes was narrowed down step by step. Subsequently, their functions were revealed by KEGG and GO enrichment analyses. Our results provided clues of potential molecular mechanisms of KD and were helpful for KD detection and treatment. |
format | Online Article Text |
id | pubmed-7327570 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-73275702020-07-17 The Blood Gene Expression Signature for Kawasaki Disease in Children Identified with Advanced Feature Selection Methods Hu, Bing Li, Yun Wang, Guilian Zhang, Yanqing Biomed Res Int Research Article Kawasaki disease (KD) is an acute vasculitis, accompanied by coronary artery aneurysm, coronary artery dilatation, arrhythmia, and other serious cardiovascular diseases. So far, the etiology of KD is unclear; it is necessary to study the molecular mechanism and related factors of KD. In this study, we analyzed the expression profiles of 75 DB (identifying bacteria), 122 DV (identifying virus), 71 HC (healthy control), and 311 KD (Kawasaki disease) samples. 332 key genes related to KD and pathogen infections were identified using a combination of advanced feature selection methods: (1) Boruta, (2) Monte-Carlo Feature Selection (MCFS), and (3) Incremental Feature Selection (IFS). The number of signature genes was narrowed down step by step. Subsequently, their functions were revealed by KEGG and GO enrichment analyses. Our results provided clues of potential molecular mechanisms of KD and were helpful for KD detection and treatment. Hindawi 2020-06-28 /pmc/articles/PMC7327570/ /pubmed/32685506 http://dx.doi.org/10.1155/2020/6062436 Text en Copyright © 2020 Bing Hu et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Hu, Bing Li, Yun Wang, Guilian Zhang, Yanqing The Blood Gene Expression Signature for Kawasaki Disease in Children Identified with Advanced Feature Selection Methods |
title | The Blood Gene Expression Signature for Kawasaki Disease in Children Identified with Advanced Feature Selection Methods |
title_full | The Blood Gene Expression Signature for Kawasaki Disease in Children Identified with Advanced Feature Selection Methods |
title_fullStr | The Blood Gene Expression Signature for Kawasaki Disease in Children Identified with Advanced Feature Selection Methods |
title_full_unstemmed | The Blood Gene Expression Signature for Kawasaki Disease in Children Identified with Advanced Feature Selection Methods |
title_short | The Blood Gene Expression Signature for Kawasaki Disease in Children Identified with Advanced Feature Selection Methods |
title_sort | blood gene expression signature for kawasaki disease in children identified with advanced feature selection methods |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7327570/ https://www.ncbi.nlm.nih.gov/pubmed/32685506 http://dx.doi.org/10.1155/2020/6062436 |
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