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Towards the routine use of in silico screenings for drug discovery using metabolic modelling

Currently, the development of new effective drugs for cancer therapy is not only hindered by development costs, drug efficacy, and drug safety but also by the rapid occurrence of drug resistance in cancer. Hence, new tools are needed to study the underlying mechanisms in cancer. Here, we discuss the...

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Detalles Bibliográficos
Autores principales: Bintener, Tamara, Pacheco, Maria Pires, Sauter, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329353/
https://www.ncbi.nlm.nih.gov/pubmed/32369553
http://dx.doi.org/10.1042/BST20190867
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author Bintener, Tamara
Pacheco, Maria Pires
Sauter, Thomas
author_facet Bintener, Tamara
Pacheco, Maria Pires
Sauter, Thomas
author_sort Bintener, Tamara
collection PubMed
description Currently, the development of new effective drugs for cancer therapy is not only hindered by development costs, drug efficacy, and drug safety but also by the rapid occurrence of drug resistance in cancer. Hence, new tools are needed to study the underlying mechanisms in cancer. Here, we discuss the current use of metabolic modelling approaches to identify cancer-specific metabolism and find possible new drug targets and drugs for repurposing. Furthermore, we list valuable resources that are needed for the reconstruction of cancer-specific models by integrating various available datasets with genome-scale metabolic reconstructions using model-building algorithms. We also discuss how new drug targets can be determined by using gene essentiality analysis, an in silico method to predict essential genes in a given condition such as cancer and how synthetic lethality studies could greatly benefit cancer patients by suggesting drug combinations with reduced side effects.
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spelling pubmed-73293532020-07-13 Towards the routine use of in silico screenings for drug discovery using metabolic modelling Bintener, Tamara Pacheco, Maria Pires Sauter, Thomas Biochem Soc Trans Review Articles Currently, the development of new effective drugs for cancer therapy is not only hindered by development costs, drug efficacy, and drug safety but also by the rapid occurrence of drug resistance in cancer. Hence, new tools are needed to study the underlying mechanisms in cancer. Here, we discuss the current use of metabolic modelling approaches to identify cancer-specific metabolism and find possible new drug targets and drugs for repurposing. Furthermore, we list valuable resources that are needed for the reconstruction of cancer-specific models by integrating various available datasets with genome-scale metabolic reconstructions using model-building algorithms. We also discuss how new drug targets can be determined by using gene essentiality analysis, an in silico method to predict essential genes in a given condition such as cancer and how synthetic lethality studies could greatly benefit cancer patients by suggesting drug combinations with reduced side effects. Portland Press Ltd. 2020-06-30 2020-05-05 /pmc/articles/PMC7329353/ /pubmed/32369553 http://dx.doi.org/10.1042/BST20190867 Text en © 2020 The Author(s) https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Review Articles
Bintener, Tamara
Pacheco, Maria Pires
Sauter, Thomas
Towards the routine use of in silico screenings for drug discovery using metabolic modelling
title Towards the routine use of in silico screenings for drug discovery using metabolic modelling
title_full Towards the routine use of in silico screenings for drug discovery using metabolic modelling
title_fullStr Towards the routine use of in silico screenings for drug discovery using metabolic modelling
title_full_unstemmed Towards the routine use of in silico screenings for drug discovery using metabolic modelling
title_short Towards the routine use of in silico screenings for drug discovery using metabolic modelling
title_sort towards the routine use of in silico screenings for drug discovery using metabolic modelling
topic Review Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329353/
https://www.ncbi.nlm.nih.gov/pubmed/32369553
http://dx.doi.org/10.1042/BST20190867
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