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Towards the routine use of in silico screenings for drug discovery using metabolic modelling
Currently, the development of new effective drugs for cancer therapy is not only hindered by development costs, drug efficacy, and drug safety but also by the rapid occurrence of drug resistance in cancer. Hence, new tools are needed to study the underlying mechanisms in cancer. Here, we discuss the...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Portland Press Ltd.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329353/ https://www.ncbi.nlm.nih.gov/pubmed/32369553 http://dx.doi.org/10.1042/BST20190867 |
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author | Bintener, Tamara Pacheco, Maria Pires Sauter, Thomas |
author_facet | Bintener, Tamara Pacheco, Maria Pires Sauter, Thomas |
author_sort | Bintener, Tamara |
collection | PubMed |
description | Currently, the development of new effective drugs for cancer therapy is not only hindered by development costs, drug efficacy, and drug safety but also by the rapid occurrence of drug resistance in cancer. Hence, new tools are needed to study the underlying mechanisms in cancer. Here, we discuss the current use of metabolic modelling approaches to identify cancer-specific metabolism and find possible new drug targets and drugs for repurposing. Furthermore, we list valuable resources that are needed for the reconstruction of cancer-specific models by integrating various available datasets with genome-scale metabolic reconstructions using model-building algorithms. We also discuss how new drug targets can be determined by using gene essentiality analysis, an in silico method to predict essential genes in a given condition such as cancer and how synthetic lethality studies could greatly benefit cancer patients by suggesting drug combinations with reduced side effects. |
format | Online Article Text |
id | pubmed-7329353 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Portland Press Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-73293532020-07-13 Towards the routine use of in silico screenings for drug discovery using metabolic modelling Bintener, Tamara Pacheco, Maria Pires Sauter, Thomas Biochem Soc Trans Review Articles Currently, the development of new effective drugs for cancer therapy is not only hindered by development costs, drug efficacy, and drug safety but also by the rapid occurrence of drug resistance in cancer. Hence, new tools are needed to study the underlying mechanisms in cancer. Here, we discuss the current use of metabolic modelling approaches to identify cancer-specific metabolism and find possible new drug targets and drugs for repurposing. Furthermore, we list valuable resources that are needed for the reconstruction of cancer-specific models by integrating various available datasets with genome-scale metabolic reconstructions using model-building algorithms. We also discuss how new drug targets can be determined by using gene essentiality analysis, an in silico method to predict essential genes in a given condition such as cancer and how synthetic lethality studies could greatly benefit cancer patients by suggesting drug combinations with reduced side effects. Portland Press Ltd. 2020-06-30 2020-05-05 /pmc/articles/PMC7329353/ /pubmed/32369553 http://dx.doi.org/10.1042/BST20190867 Text en © 2020 The Author(s) https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Review Articles Bintener, Tamara Pacheco, Maria Pires Sauter, Thomas Towards the routine use of in silico screenings for drug discovery using metabolic modelling |
title | Towards the routine use of in silico screenings for drug discovery using metabolic modelling |
title_full | Towards the routine use of in silico screenings for drug discovery using metabolic modelling |
title_fullStr | Towards the routine use of in silico screenings for drug discovery using metabolic modelling |
title_full_unstemmed | Towards the routine use of in silico screenings for drug discovery using metabolic modelling |
title_short | Towards the routine use of in silico screenings for drug discovery using metabolic modelling |
title_sort | towards the routine use of in silico screenings for drug discovery using metabolic modelling |
topic | Review Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329353/ https://www.ncbi.nlm.nih.gov/pubmed/32369553 http://dx.doi.org/10.1042/BST20190867 |
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