Cargando…

A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data

The use of smartphone-based location data to quantify behavior longitudinally and passively is rapidly gaining traction in neuropsychiatric research. However, a standardized and validated preprocessing framework for deriving behavioral phenotypes from smartphone-based location data is currently lack...

Descripción completa

Detalles Bibliográficos
Autores principales: Jongs, Niels, Jagesar, Raj, van Haren, Neeltje E. M., Penninx, Brenda W. J. H., Reus, Lianne, Visser, Pieter J., van der Wee, Nic J. A., Koning, Ina M., Arango, Celso, Sommer, Iris E. C., Eijkemans, Marinus J. C., Vorstman, Jacob A., Kas, Martien J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329884/
https://www.ncbi.nlm.nih.gov/pubmed/32612118
http://dx.doi.org/10.1038/s41398-020-00893-4
_version_ 1783552993372667904
author Jongs, Niels
Jagesar, Raj
van Haren, Neeltje E. M.
Penninx, Brenda W. J. H.
Reus, Lianne
Visser, Pieter J.
van der Wee, Nic J. A.
Koning, Ina M.
Arango, Celso
Sommer, Iris E. C.
Eijkemans, Marinus J. C.
Vorstman, Jacob A.
Kas, Martien J.
author_facet Jongs, Niels
Jagesar, Raj
van Haren, Neeltje E. M.
Penninx, Brenda W. J. H.
Reus, Lianne
Visser, Pieter J.
van der Wee, Nic J. A.
Koning, Ina M.
Arango, Celso
Sommer, Iris E. C.
Eijkemans, Marinus J. C.
Vorstman, Jacob A.
Kas, Martien J.
author_sort Jongs, Niels
collection PubMed
description The use of smartphone-based location data to quantify behavior longitudinally and passively is rapidly gaining traction in neuropsychiatric research. However, a standardized and validated preprocessing framework for deriving behavioral phenotypes from smartphone-based location data is currently lacking. Here, we present a preprocessing framework consisting of methods that are validated in the context of geospatial data. This framework aims to generate context-enriched location data by identifying stationary, non-stationary, and recurrent stationary states in movement patterns. Subsequently, this context-enriched data is used to derive a series of behavioral phenotypes that are related to movement. By using smartphone-based location data collected from 245 subjects, including patients with schizophrenia, we show that the proposed framework is effective and accurate in generating context-enriched location data. This data was subsequently used to derive behavioral readouts that were sensitive in detecting behavioral nuances related to schizophrenia and aging, such as the time spent at home and the number of unique places visited. Overall, our results indicate that the proposed framework reliably preprocesses raw smartphone-based location data in such a manner that relevant behavioral phenotypes of interest can be derived.
format Online
Article
Text
id pubmed-7329884
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-73298842020-07-06 A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data Jongs, Niels Jagesar, Raj van Haren, Neeltje E. M. Penninx, Brenda W. J. H. Reus, Lianne Visser, Pieter J. van der Wee, Nic J. A. Koning, Ina M. Arango, Celso Sommer, Iris E. C. Eijkemans, Marinus J. C. Vorstman, Jacob A. Kas, Martien J. Transl Psychiatry Article The use of smartphone-based location data to quantify behavior longitudinally and passively is rapidly gaining traction in neuropsychiatric research. However, a standardized and validated preprocessing framework for deriving behavioral phenotypes from smartphone-based location data is currently lacking. Here, we present a preprocessing framework consisting of methods that are validated in the context of geospatial data. This framework aims to generate context-enriched location data by identifying stationary, non-stationary, and recurrent stationary states in movement patterns. Subsequently, this context-enriched data is used to derive a series of behavioral phenotypes that are related to movement. By using smartphone-based location data collected from 245 subjects, including patients with schizophrenia, we show that the proposed framework is effective and accurate in generating context-enriched location data. This data was subsequently used to derive behavioral readouts that were sensitive in detecting behavioral nuances related to schizophrenia and aging, such as the time spent at home and the number of unique places visited. Overall, our results indicate that the proposed framework reliably preprocesses raw smartphone-based location data in such a manner that relevant behavioral phenotypes of interest can be derived. Nature Publishing Group UK 2020-07-01 /pmc/articles/PMC7329884/ /pubmed/32612118 http://dx.doi.org/10.1038/s41398-020-00893-4 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Jongs, Niels
Jagesar, Raj
van Haren, Neeltje E. M.
Penninx, Brenda W. J. H.
Reus, Lianne
Visser, Pieter J.
van der Wee, Nic J. A.
Koning, Ina M.
Arango, Celso
Sommer, Iris E. C.
Eijkemans, Marinus J. C.
Vorstman, Jacob A.
Kas, Martien J.
A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data
title A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data
title_full A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data
title_fullStr A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data
title_full_unstemmed A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data
title_short A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data
title_sort framework for assessing neuropsychiatric phenotypes by using smartphone-based location data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329884/
https://www.ncbi.nlm.nih.gov/pubmed/32612118
http://dx.doi.org/10.1038/s41398-020-00893-4
work_keys_str_mv AT jongsniels aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT jagesarraj aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT vanharenneeltjeem aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT penninxbrendawjh aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT reuslianne aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT visserpieterj aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT vanderweenicja aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT koninginam aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT arangocelso aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT sommeririsec aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT eijkemansmarinusjc aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT vorstmanjacoba aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT kasmartienj aframeworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT jongsniels frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT jagesarraj frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT vanharenneeltjeem frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT penninxbrendawjh frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT reuslianne frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT visserpieterj frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT vanderweenicja frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT koninginam frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT arangocelso frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT sommeririsec frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT eijkemansmarinusjc frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT vorstmanjacoba frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata
AT kasmartienj frameworkforassessingneuropsychiatricphenotypesbyusingsmartphonebasedlocationdata