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A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data
The use of smartphone-based location data to quantify behavior longitudinally and passively is rapidly gaining traction in neuropsychiatric research. However, a standardized and validated preprocessing framework for deriving behavioral phenotypes from smartphone-based location data is currently lack...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329884/ https://www.ncbi.nlm.nih.gov/pubmed/32612118 http://dx.doi.org/10.1038/s41398-020-00893-4 |
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author | Jongs, Niels Jagesar, Raj van Haren, Neeltje E. M. Penninx, Brenda W. J. H. Reus, Lianne Visser, Pieter J. van der Wee, Nic J. A. Koning, Ina M. Arango, Celso Sommer, Iris E. C. Eijkemans, Marinus J. C. Vorstman, Jacob A. Kas, Martien J. |
author_facet | Jongs, Niels Jagesar, Raj van Haren, Neeltje E. M. Penninx, Brenda W. J. H. Reus, Lianne Visser, Pieter J. van der Wee, Nic J. A. Koning, Ina M. Arango, Celso Sommer, Iris E. C. Eijkemans, Marinus J. C. Vorstman, Jacob A. Kas, Martien J. |
author_sort | Jongs, Niels |
collection | PubMed |
description | The use of smartphone-based location data to quantify behavior longitudinally and passively is rapidly gaining traction in neuropsychiatric research. However, a standardized and validated preprocessing framework for deriving behavioral phenotypes from smartphone-based location data is currently lacking. Here, we present a preprocessing framework consisting of methods that are validated in the context of geospatial data. This framework aims to generate context-enriched location data by identifying stationary, non-stationary, and recurrent stationary states in movement patterns. Subsequently, this context-enriched data is used to derive a series of behavioral phenotypes that are related to movement. By using smartphone-based location data collected from 245 subjects, including patients with schizophrenia, we show that the proposed framework is effective and accurate in generating context-enriched location data. This data was subsequently used to derive behavioral readouts that were sensitive in detecting behavioral nuances related to schizophrenia and aging, such as the time spent at home and the number of unique places visited. Overall, our results indicate that the proposed framework reliably preprocesses raw smartphone-based location data in such a manner that relevant behavioral phenotypes of interest can be derived. |
format | Online Article Text |
id | pubmed-7329884 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-73298842020-07-06 A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data Jongs, Niels Jagesar, Raj van Haren, Neeltje E. M. Penninx, Brenda W. J. H. Reus, Lianne Visser, Pieter J. van der Wee, Nic J. A. Koning, Ina M. Arango, Celso Sommer, Iris E. C. Eijkemans, Marinus J. C. Vorstman, Jacob A. Kas, Martien J. Transl Psychiatry Article The use of smartphone-based location data to quantify behavior longitudinally and passively is rapidly gaining traction in neuropsychiatric research. However, a standardized and validated preprocessing framework for deriving behavioral phenotypes from smartphone-based location data is currently lacking. Here, we present a preprocessing framework consisting of methods that are validated in the context of geospatial data. This framework aims to generate context-enriched location data by identifying stationary, non-stationary, and recurrent stationary states in movement patterns. Subsequently, this context-enriched data is used to derive a series of behavioral phenotypes that are related to movement. By using smartphone-based location data collected from 245 subjects, including patients with schizophrenia, we show that the proposed framework is effective and accurate in generating context-enriched location data. This data was subsequently used to derive behavioral readouts that were sensitive in detecting behavioral nuances related to schizophrenia and aging, such as the time spent at home and the number of unique places visited. Overall, our results indicate that the proposed framework reliably preprocesses raw smartphone-based location data in such a manner that relevant behavioral phenotypes of interest can be derived. Nature Publishing Group UK 2020-07-01 /pmc/articles/PMC7329884/ /pubmed/32612118 http://dx.doi.org/10.1038/s41398-020-00893-4 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Jongs, Niels Jagesar, Raj van Haren, Neeltje E. M. Penninx, Brenda W. J. H. Reus, Lianne Visser, Pieter J. van der Wee, Nic J. A. Koning, Ina M. Arango, Celso Sommer, Iris E. C. Eijkemans, Marinus J. C. Vorstman, Jacob A. Kas, Martien J. A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data |
title | A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data |
title_full | A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data |
title_fullStr | A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data |
title_full_unstemmed | A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data |
title_short | A framework for assessing neuropsychiatric phenotypes by using smartphone-based location data |
title_sort | framework for assessing neuropsychiatric phenotypes by using smartphone-based location data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329884/ https://www.ncbi.nlm.nih.gov/pubmed/32612118 http://dx.doi.org/10.1038/s41398-020-00893-4 |
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