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Draft genome sequence data of two Salmonella bacteria from serogroup C type
Salmonella is a gram-negative rod-shape bacterium from the family of Enterobacteriaceae that can cause a wide range of human disease such as enteric fever, gastroenteritis and bacteremia. Here we sequenced two genomes of Salmonella bacteria isolated from the Gallus gallus domesticus host. Genomic DN...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329923/ https://www.ncbi.nlm.nih.gov/pubmed/32637513 http://dx.doi.org/10.1016/j.dib.2020.105920 |
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author | Jiksing, Calvin Voo, Christopher Lok Yung Rodrigues, Kenneth Francis |
author_facet | Jiksing, Calvin Voo, Christopher Lok Yung Rodrigues, Kenneth Francis |
author_sort | Jiksing, Calvin |
collection | PubMed |
description | Salmonella is a gram-negative rod-shape bacterium from the family of Enterobacteriaceae that can cause a wide range of human disease such as enteric fever, gastroenteritis and bacteremia. Here we sequenced two genomes of Salmonella bacteria isolated from the Gallus gallus domesticus host. Genomic DNA of the two Salmonella isolates were extracted and subjected to whole genome sequencing using Illumina platform. The draft genome size of the two Salmonella isolates was determined to be 4,902,295 bp (S18) and 4,847,310 bp (S20) respectively. The percentage of GC content for both draft genomes is the same which is 52.1%. Both the whole genome shotgun project (S18 and S20) has been deposited in National Center for Biotechnology Information Sequence Read Archive under the accession number of SRR7503041 (S18) and SRR7503040 (S20). The sequenced genome (S18 and S20) were aligned with the reference genome and three other Salmonella genomes from serogroup B, D and E. The data obtained show the presence of unique DNA sequences in S18 and S20 genomes. This unique DNA sequences are from the fimbrial gene group. |
format | Online Article Text |
id | pubmed-7329923 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-73299232020-07-06 Draft genome sequence data of two Salmonella bacteria from serogroup C type Jiksing, Calvin Voo, Christopher Lok Yung Rodrigues, Kenneth Francis Data Brief Genetics, Genomics and Molecular Biology Salmonella is a gram-negative rod-shape bacterium from the family of Enterobacteriaceae that can cause a wide range of human disease such as enteric fever, gastroenteritis and bacteremia. Here we sequenced two genomes of Salmonella bacteria isolated from the Gallus gallus domesticus host. Genomic DNA of the two Salmonella isolates were extracted and subjected to whole genome sequencing using Illumina platform. The draft genome size of the two Salmonella isolates was determined to be 4,902,295 bp (S18) and 4,847,310 bp (S20) respectively. The percentage of GC content for both draft genomes is the same which is 52.1%. Both the whole genome shotgun project (S18 and S20) has been deposited in National Center for Biotechnology Information Sequence Read Archive under the accession number of SRR7503041 (S18) and SRR7503040 (S20). The sequenced genome (S18 and S20) were aligned with the reference genome and three other Salmonella genomes from serogroup B, D and E. The data obtained show the presence of unique DNA sequences in S18 and S20 genomes. This unique DNA sequences are from the fimbrial gene group. Elsevier 2020-06-22 /pmc/articles/PMC7329923/ /pubmed/32637513 http://dx.doi.org/10.1016/j.dib.2020.105920 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Genetics, Genomics and Molecular Biology Jiksing, Calvin Voo, Christopher Lok Yung Rodrigues, Kenneth Francis Draft genome sequence data of two Salmonella bacteria from serogroup C type |
title | Draft genome sequence data of two Salmonella bacteria from serogroup C type |
title_full | Draft genome sequence data of two Salmonella bacteria from serogroup C type |
title_fullStr | Draft genome sequence data of two Salmonella bacteria from serogroup C type |
title_full_unstemmed | Draft genome sequence data of two Salmonella bacteria from serogroup C type |
title_short | Draft genome sequence data of two Salmonella bacteria from serogroup C type |
title_sort | draft genome sequence data of two salmonella bacteria from serogroup c type |
topic | Genetics, Genomics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329923/ https://www.ncbi.nlm.nih.gov/pubmed/32637513 http://dx.doi.org/10.1016/j.dib.2020.105920 |
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