Cargando…

Draft genome sequence data of two Salmonella bacteria from serogroup C type

Salmonella is a gram-negative rod-shape bacterium from the family of Enterobacteriaceae that can cause a wide range of human disease such as enteric fever, gastroenteritis and bacteremia. Here we sequenced two genomes of Salmonella bacteria isolated from the Gallus gallus domesticus host. Genomic DN...

Descripción completa

Detalles Bibliográficos
Autores principales: Jiksing, Calvin, Voo, Christopher Lok Yung, Rodrigues, Kenneth Francis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329923/
https://www.ncbi.nlm.nih.gov/pubmed/32637513
http://dx.doi.org/10.1016/j.dib.2020.105920
_version_ 1783553002271932416
author Jiksing, Calvin
Voo, Christopher Lok Yung
Rodrigues, Kenneth Francis
author_facet Jiksing, Calvin
Voo, Christopher Lok Yung
Rodrigues, Kenneth Francis
author_sort Jiksing, Calvin
collection PubMed
description Salmonella is a gram-negative rod-shape bacterium from the family of Enterobacteriaceae that can cause a wide range of human disease such as enteric fever, gastroenteritis and bacteremia. Here we sequenced two genomes of Salmonella bacteria isolated from the Gallus gallus domesticus host. Genomic DNA of the two Salmonella isolates were extracted and subjected to whole genome sequencing using Illumina platform. The draft genome size of the two Salmonella isolates was determined to be 4,902,295 bp (S18) and 4,847,310 bp (S20) respectively. The percentage of GC content for both draft genomes is the same which is 52.1%. Both the whole genome shotgun project (S18 and S20) has been deposited in National Center for Biotechnology Information Sequence Read Archive under the accession number of SRR7503041 (S18) and SRR7503040 (S20). The sequenced genome (S18 and S20) were aligned with the reference genome and three other Salmonella genomes from serogroup B, D and E. The data obtained show the presence of unique DNA sequences in S18 and S20 genomes. This unique DNA sequences are from the fimbrial gene group.
format Online
Article
Text
id pubmed-7329923
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-73299232020-07-06 Draft genome sequence data of two Salmonella bacteria from serogroup C type Jiksing, Calvin Voo, Christopher Lok Yung Rodrigues, Kenneth Francis Data Brief Genetics, Genomics and Molecular Biology Salmonella is a gram-negative rod-shape bacterium from the family of Enterobacteriaceae that can cause a wide range of human disease such as enteric fever, gastroenteritis and bacteremia. Here we sequenced two genomes of Salmonella bacteria isolated from the Gallus gallus domesticus host. Genomic DNA of the two Salmonella isolates were extracted and subjected to whole genome sequencing using Illumina platform. The draft genome size of the two Salmonella isolates was determined to be 4,902,295 bp (S18) and 4,847,310 bp (S20) respectively. The percentage of GC content for both draft genomes is the same which is 52.1%. Both the whole genome shotgun project (S18 and S20) has been deposited in National Center for Biotechnology Information Sequence Read Archive under the accession number of SRR7503041 (S18) and SRR7503040 (S20). The sequenced genome (S18 and S20) were aligned with the reference genome and three other Salmonella genomes from serogroup B, D and E. The data obtained show the presence of unique DNA sequences in S18 and S20 genomes. This unique DNA sequences are from the fimbrial gene group. Elsevier 2020-06-22 /pmc/articles/PMC7329923/ /pubmed/32637513 http://dx.doi.org/10.1016/j.dib.2020.105920 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Jiksing, Calvin
Voo, Christopher Lok Yung
Rodrigues, Kenneth Francis
Draft genome sequence data of two Salmonella bacteria from serogroup C type
title Draft genome sequence data of two Salmonella bacteria from serogroup C type
title_full Draft genome sequence data of two Salmonella bacteria from serogroup C type
title_fullStr Draft genome sequence data of two Salmonella bacteria from serogroup C type
title_full_unstemmed Draft genome sequence data of two Salmonella bacteria from serogroup C type
title_short Draft genome sequence data of two Salmonella bacteria from serogroup C type
title_sort draft genome sequence data of two salmonella bacteria from serogroup c type
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7329923/
https://www.ncbi.nlm.nih.gov/pubmed/32637513
http://dx.doi.org/10.1016/j.dib.2020.105920
work_keys_str_mv AT jiksingcalvin draftgenomesequencedataoftwosalmonellabacteriafromserogroupctype
AT voochristopherlokyung draftgenomesequencedataoftwosalmonellabacteriafromserogroupctype
AT rodrigueskennethfrancis draftgenomesequencedataoftwosalmonellabacteriafromserogroupctype