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Genetic variation in NOD1/CARD4 and NOD2/CARD15 immune sensors and risk of osteoporosis

The present study was aimed to investigate the relationship between NOD1/CARD4 and NOD2/CARD15 gene polymorphisms and osteoporosis in the Turkish population. The first time we thought that the functional polymorphisms in NOD1/CARD4 and NOD2/CARD15 genes might have triggered the development of osteop...

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Autores principales: Soyocak, Ahu, Özgen, Merih, Turgut Coşan, Didem, Kurt, Hülyam, Doğaner, Fulya, Armağan, Onur, Değirmenci, İrfan, Şahin Mutlu, Fezan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7332673/
https://www.ncbi.nlm.nih.gov/pubmed/32578848
http://dx.doi.org/10.1042/BSR20192313
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author Soyocak, Ahu
Özgen, Merih
Turgut Coşan, Didem
Kurt, Hülyam
Doğaner, Fulya
Armağan, Onur
Değirmenci, İrfan
Şahin Mutlu, Fezan
author_facet Soyocak, Ahu
Özgen, Merih
Turgut Coşan, Didem
Kurt, Hülyam
Doğaner, Fulya
Armağan, Onur
Değirmenci, İrfan
Şahin Mutlu, Fezan
author_sort Soyocak, Ahu
collection PubMed
description The present study was aimed to investigate the relationship between NOD1/CARD4 and NOD2/CARD15 gene polymorphisms and osteoporosis in the Turkish population. The first time we thought that the functional polymorphisms in NOD1/CARD4 and NOD2/CARD15 genes might have triggered the development of osteoporosis. The objective of our study was to determine the relationship between NOD1/CARD4 and NOD2/CARD15 SNPs and osteoporosis. The NOD1/CARD4 (rs5743336) and NOD2/CARD15 (rs2066847) SNPs were analyzed by PCR restriction fragment length polymorphism (PCR-RFLP) in 94 healthy controls and 164 subjects with osteoporosis. PCR products were digested with restriction enzymes AvaI for NOD1/CARD4 and ApaI for NOD2/CARD15. We found that NOD1/CARD4 genotype distribution of AA, GA and GG were 15, 44 and 41% for patients and 17, 46 and 37% for controls, respectively. NOD2/CARD15 mutation was found only in three patients (1.8%) as heterozygote. The results did not show any statistical difference between NOD1/CARD4 and NOD2/CARD15 genotype distribution of patients and healthy groups (χ(2) = 1.740, P=0.187; χ(2) = 1.311, P=0.519). However, the most frequent AG genotype (46%) of NOD1/CARD4 was observed in healthy controls, GG genotype (44%) of NOD1/CARD4 was observed as the most frequent in osteoporotic patients. NOD2/CARD15 WT/WT genotype, the most frequent genotype, was observed in both groups. Statistical analysis revealed that NOD1/CARD4 and NOD2/CARD15 polymorphisms are not associated with osteoporosis. However, a definite judgement is difficult to be made due to restricted number of patients and small size of control group. Further research is sorely warranted in this direction.
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spelling pubmed-73326732020-07-15 Genetic variation in NOD1/CARD4 and NOD2/CARD15 immune sensors and risk of osteoporosis Soyocak, Ahu Özgen, Merih Turgut Coşan, Didem Kurt, Hülyam Doğaner, Fulya Armağan, Onur Değirmenci, İrfan Şahin Mutlu, Fezan Biosci Rep Genomics The present study was aimed to investigate the relationship between NOD1/CARD4 and NOD2/CARD15 gene polymorphisms and osteoporosis in the Turkish population. The first time we thought that the functional polymorphisms in NOD1/CARD4 and NOD2/CARD15 genes might have triggered the development of osteoporosis. The objective of our study was to determine the relationship between NOD1/CARD4 and NOD2/CARD15 SNPs and osteoporosis. The NOD1/CARD4 (rs5743336) and NOD2/CARD15 (rs2066847) SNPs were analyzed by PCR restriction fragment length polymorphism (PCR-RFLP) in 94 healthy controls and 164 subjects with osteoporosis. PCR products were digested with restriction enzymes AvaI for NOD1/CARD4 and ApaI for NOD2/CARD15. We found that NOD1/CARD4 genotype distribution of AA, GA and GG were 15, 44 and 41% for patients and 17, 46 and 37% for controls, respectively. NOD2/CARD15 mutation was found only in three patients (1.8%) as heterozygote. The results did not show any statistical difference between NOD1/CARD4 and NOD2/CARD15 genotype distribution of patients and healthy groups (χ(2) = 1.740, P=0.187; χ(2) = 1.311, P=0.519). However, the most frequent AG genotype (46%) of NOD1/CARD4 was observed in healthy controls, GG genotype (44%) of NOD1/CARD4 was observed as the most frequent in osteoporotic patients. NOD2/CARD15 WT/WT genotype, the most frequent genotype, was observed in both groups. Statistical analysis revealed that NOD1/CARD4 and NOD2/CARD15 polymorphisms are not associated with osteoporosis. However, a definite judgement is difficult to be made due to restricted number of patients and small size of control group. Further research is sorely warranted in this direction. Portland Press Ltd. 2020-07-02 /pmc/articles/PMC7332673/ /pubmed/32578848 http://dx.doi.org/10.1042/BSR20192313 Text en © 2020 The Author(s). https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY).
spellingShingle Genomics
Soyocak, Ahu
Özgen, Merih
Turgut Coşan, Didem
Kurt, Hülyam
Doğaner, Fulya
Armağan, Onur
Değirmenci, İrfan
Şahin Mutlu, Fezan
Genetic variation in NOD1/CARD4 and NOD2/CARD15 immune sensors and risk of osteoporosis
title Genetic variation in NOD1/CARD4 and NOD2/CARD15 immune sensors and risk of osteoporosis
title_full Genetic variation in NOD1/CARD4 and NOD2/CARD15 immune sensors and risk of osteoporosis
title_fullStr Genetic variation in NOD1/CARD4 and NOD2/CARD15 immune sensors and risk of osteoporosis
title_full_unstemmed Genetic variation in NOD1/CARD4 and NOD2/CARD15 immune sensors and risk of osteoporosis
title_short Genetic variation in NOD1/CARD4 and NOD2/CARD15 immune sensors and risk of osteoporosis
title_sort genetic variation in nod1/card4 and nod2/card15 immune sensors and risk of osteoporosis
topic Genomics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7332673/
https://www.ncbi.nlm.nih.gov/pubmed/32578848
http://dx.doi.org/10.1042/BSR20192313
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