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Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients

BACKGROUND: Patients with early-stage lung adenocarcinoma (LUAD) exhibit significant heterogeneity in overall survival. The current tumour-node-metastasis staging system is insufficient to provide precise prediction for prognosis. METHODS: We quantified the levels of various hallmarks of cancer and...

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Autores principales: Sun, Jing, Zhao, Tianyu, Zhao, Di, Qi, Xin, Bao, Xuanwen, Shi, Run, Su, Chuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7333486/
https://www.ncbi.nlm.nih.gov/pubmed/32655701
http://dx.doi.org/10.1177/1758835920937904
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author Sun, Jing
Zhao, Tianyu
Zhao, Di
Qi, Xin
Bao, Xuanwen
Shi, Run
Su, Chuan
author_facet Sun, Jing
Zhao, Tianyu
Zhao, Di
Qi, Xin
Bao, Xuanwen
Shi, Run
Su, Chuan
author_sort Sun, Jing
collection PubMed
description BACKGROUND: Patients with early-stage lung adenocarcinoma (LUAD) exhibit significant heterogeneity in overall survival. The current tumour-node-metastasis staging system is insufficient to provide precise prediction for prognosis. METHODS: We quantified the levels of various hallmarks of cancer and identified hypoxia as the primary risk factor for overall survival in early-stage LUAD. Different bioinformatic and statistical methods were combined to construct a robust hypoxia-related gene signature for prognosis. Furthermore, a decision tree and a nomogram were constructed based on the gene signature and clinicopathological features to improve risk stratification and quantify risk assessment for individual patients. RESULTS: The hypoxia-related gene signature discriminated high-risk patients at an early stage in our investigated cohorts. Survival analyses demonstrated that our gene signature served as an independent risk factor for overall survival. The decision tree identified risk subgroups powerfully, and the nomogram exhibited high accuracy. CONCLUSIONS: Our study might contribute to the optimization of risk stratification for survival and personalized management of early-stage LUAD.
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spelling pubmed-73334862020-07-10 Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients Sun, Jing Zhao, Tianyu Zhao, Di Qi, Xin Bao, Xuanwen Shi, Run Su, Chuan Ther Adv Med Oncol Original Research BACKGROUND: Patients with early-stage lung adenocarcinoma (LUAD) exhibit significant heterogeneity in overall survival. The current tumour-node-metastasis staging system is insufficient to provide precise prediction for prognosis. METHODS: We quantified the levels of various hallmarks of cancer and identified hypoxia as the primary risk factor for overall survival in early-stage LUAD. Different bioinformatic and statistical methods were combined to construct a robust hypoxia-related gene signature for prognosis. Furthermore, a decision tree and a nomogram were constructed based on the gene signature and clinicopathological features to improve risk stratification and quantify risk assessment for individual patients. RESULTS: The hypoxia-related gene signature discriminated high-risk patients at an early stage in our investigated cohorts. Survival analyses demonstrated that our gene signature served as an independent risk factor for overall survival. The decision tree identified risk subgroups powerfully, and the nomogram exhibited high accuracy. CONCLUSIONS: Our study might contribute to the optimization of risk stratification for survival and personalized management of early-stage LUAD. SAGE Publications 2020-07-02 /pmc/articles/PMC7333486/ /pubmed/32655701 http://dx.doi.org/10.1177/1758835920937904 Text en © The Author(s), 2020 https://creativecommons.org/licenses/by/4.0/ This article is distributed under the terms of the Creative Commons Attribution 4.0 License (https://creativecommons.org/licenses/by/4.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Research
Sun, Jing
Zhao, Tianyu
Zhao, Di
Qi, Xin
Bao, Xuanwen
Shi, Run
Su, Chuan
Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients
title Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients
title_full Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients
title_fullStr Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients
title_full_unstemmed Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients
title_short Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients
title_sort development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7333486/
https://www.ncbi.nlm.nih.gov/pubmed/32655701
http://dx.doi.org/10.1177/1758835920937904
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