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Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients
BACKGROUND: Patients with early-stage lung adenocarcinoma (LUAD) exhibit significant heterogeneity in overall survival. The current tumour-node-metastasis staging system is insufficient to provide precise prediction for prognosis. METHODS: We quantified the levels of various hallmarks of cancer and...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7333486/ https://www.ncbi.nlm.nih.gov/pubmed/32655701 http://dx.doi.org/10.1177/1758835920937904 |
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author | Sun, Jing Zhao, Tianyu Zhao, Di Qi, Xin Bao, Xuanwen Shi, Run Su, Chuan |
author_facet | Sun, Jing Zhao, Tianyu Zhao, Di Qi, Xin Bao, Xuanwen Shi, Run Su, Chuan |
author_sort | Sun, Jing |
collection | PubMed |
description | BACKGROUND: Patients with early-stage lung adenocarcinoma (LUAD) exhibit significant heterogeneity in overall survival. The current tumour-node-metastasis staging system is insufficient to provide precise prediction for prognosis. METHODS: We quantified the levels of various hallmarks of cancer and identified hypoxia as the primary risk factor for overall survival in early-stage LUAD. Different bioinformatic and statistical methods were combined to construct a robust hypoxia-related gene signature for prognosis. Furthermore, a decision tree and a nomogram were constructed based on the gene signature and clinicopathological features to improve risk stratification and quantify risk assessment for individual patients. RESULTS: The hypoxia-related gene signature discriminated high-risk patients at an early stage in our investigated cohorts. Survival analyses demonstrated that our gene signature served as an independent risk factor for overall survival. The decision tree identified risk subgroups powerfully, and the nomogram exhibited high accuracy. CONCLUSIONS: Our study might contribute to the optimization of risk stratification for survival and personalized management of early-stage LUAD. |
format | Online Article Text |
id | pubmed-7333486 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-73334862020-07-10 Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients Sun, Jing Zhao, Tianyu Zhao, Di Qi, Xin Bao, Xuanwen Shi, Run Su, Chuan Ther Adv Med Oncol Original Research BACKGROUND: Patients with early-stage lung adenocarcinoma (LUAD) exhibit significant heterogeneity in overall survival. The current tumour-node-metastasis staging system is insufficient to provide precise prediction for prognosis. METHODS: We quantified the levels of various hallmarks of cancer and identified hypoxia as the primary risk factor for overall survival in early-stage LUAD. Different bioinformatic and statistical methods were combined to construct a robust hypoxia-related gene signature for prognosis. Furthermore, a decision tree and a nomogram were constructed based on the gene signature and clinicopathological features to improve risk stratification and quantify risk assessment for individual patients. RESULTS: The hypoxia-related gene signature discriminated high-risk patients at an early stage in our investigated cohorts. Survival analyses demonstrated that our gene signature served as an independent risk factor for overall survival. The decision tree identified risk subgroups powerfully, and the nomogram exhibited high accuracy. CONCLUSIONS: Our study might contribute to the optimization of risk stratification for survival and personalized management of early-stage LUAD. SAGE Publications 2020-07-02 /pmc/articles/PMC7333486/ /pubmed/32655701 http://dx.doi.org/10.1177/1758835920937904 Text en © The Author(s), 2020 https://creativecommons.org/licenses/by/4.0/ This article is distributed under the terms of the Creative Commons Attribution 4.0 License (https://creativecommons.org/licenses/by/4.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Sun, Jing Zhao, Tianyu Zhao, Di Qi, Xin Bao, Xuanwen Shi, Run Su, Chuan Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients |
title | Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients |
title_full | Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients |
title_fullStr | Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients |
title_full_unstemmed | Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients |
title_short | Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients |
title_sort | development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7333486/ https://www.ncbi.nlm.nih.gov/pubmed/32655701 http://dx.doi.org/10.1177/1758835920937904 |
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