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Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia

This data article provides population frequencies for 21 autosomal and two sex determining short tandem repeat (STR) loci in unrelated Kedayan individuals. This article is related to the research paper entitled “Forensic parameters and ancestral fraction in the Kedayan population inferred using 21 a...

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Autores principales: Hakim, Hashom Mohd, Khan, Hussein Omar, Ismail, Siti Afifah, Lalung, Japareng, Kofi, Abban Edward, Abdullah, Mohd Tajuddin, Chambers, Geoffrey Keith, Edinur, Hisham Atan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334294/
https://www.ncbi.nlm.nih.gov/pubmed/32642519
http://dx.doi.org/10.1016/j.dib.2020.105909
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author Hakim, Hashom Mohd
Khan, Hussein Omar
Ismail, Siti Afifah
Lalung, Japareng
Kofi, Abban Edward
Abdullah, Mohd Tajuddin
Chambers, Geoffrey Keith
Edinur, Hisham Atan
author_facet Hakim, Hashom Mohd
Khan, Hussein Omar
Ismail, Siti Afifah
Lalung, Japareng
Kofi, Abban Edward
Abdullah, Mohd Tajuddin
Chambers, Geoffrey Keith
Edinur, Hisham Atan
author_sort Hakim, Hashom Mohd
collection PubMed
description This data article provides population frequencies for 21 autosomal and two sex determining short tandem repeat (STR) loci in unrelated Kedayan individuals. This article is related to the research paper entitled “Forensic parameters and ancestral fraction in the Kedayan population inferred using 21 autosomal STR loci” [1] where these same data were subjected to ancestry and forensic analyses. We have collected 200 blood samples consisting of 128 male and 72 female volunteer representatives from Kedayan people residing in various parts of Borneo. All 23 STR loci were simultaneously amplified using Globalfiler™ Express PCR and amplicons were separated using an ABI 3500xl Genetic Analyzer. The STR allele calls at each locus were called using GeneMapper(Ⓡ) ID-X Software v1.4, while several algorithms in Arlequin software version 3.5 were used to estimate Hardy–Weinberg equilibrium (HWE) and linkage disequilibrium (LD) between pairs of STR loci.
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spelling pubmed-73342942020-07-07 Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia Hakim, Hashom Mohd Khan, Hussein Omar Ismail, Siti Afifah Lalung, Japareng Kofi, Abban Edward Abdullah, Mohd Tajuddin Chambers, Geoffrey Keith Edinur, Hisham Atan Data Brief Biochemistry, Genetics and Molecular Biology This data article provides population frequencies for 21 autosomal and two sex determining short tandem repeat (STR) loci in unrelated Kedayan individuals. This article is related to the research paper entitled “Forensic parameters and ancestral fraction in the Kedayan population inferred using 21 autosomal STR loci” [1] where these same data were subjected to ancestry and forensic analyses. We have collected 200 blood samples consisting of 128 male and 72 female volunteer representatives from Kedayan people residing in various parts of Borneo. All 23 STR loci were simultaneously amplified using Globalfiler™ Express PCR and amplicons were separated using an ABI 3500xl Genetic Analyzer. The STR allele calls at each locus were called using GeneMapper(Ⓡ) ID-X Software v1.4, while several algorithms in Arlequin software version 3.5 were used to estimate Hardy–Weinberg equilibrium (HWE) and linkage disequilibrium (LD) between pairs of STR loci. Elsevier 2020-06-21 /pmc/articles/PMC7334294/ /pubmed/32642519 http://dx.doi.org/10.1016/j.dib.2020.105909 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Biochemistry, Genetics and Molecular Biology
Hakim, Hashom Mohd
Khan, Hussein Omar
Ismail, Siti Afifah
Lalung, Japareng
Kofi, Abban Edward
Abdullah, Mohd Tajuddin
Chambers, Geoffrey Keith
Edinur, Hisham Atan
Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia
title Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia
title_full Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia
title_fullStr Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia
title_full_unstemmed Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia
title_short Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia
title_sort dataset on 21 autosomal and two sex determining short tandem repeat loci in the kedayan population in borneo, malaysia
topic Biochemistry, Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334294/
https://www.ncbi.nlm.nih.gov/pubmed/32642519
http://dx.doi.org/10.1016/j.dib.2020.105909
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