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Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia
This data article provides population frequencies for 21 autosomal and two sex determining short tandem repeat (STR) loci in unrelated Kedayan individuals. This article is related to the research paper entitled “Forensic parameters and ancestral fraction in the Kedayan population inferred using 21 a...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334294/ https://www.ncbi.nlm.nih.gov/pubmed/32642519 http://dx.doi.org/10.1016/j.dib.2020.105909 |
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author | Hakim, Hashom Mohd Khan, Hussein Omar Ismail, Siti Afifah Lalung, Japareng Kofi, Abban Edward Abdullah, Mohd Tajuddin Chambers, Geoffrey Keith Edinur, Hisham Atan |
author_facet | Hakim, Hashom Mohd Khan, Hussein Omar Ismail, Siti Afifah Lalung, Japareng Kofi, Abban Edward Abdullah, Mohd Tajuddin Chambers, Geoffrey Keith Edinur, Hisham Atan |
author_sort | Hakim, Hashom Mohd |
collection | PubMed |
description | This data article provides population frequencies for 21 autosomal and two sex determining short tandem repeat (STR) loci in unrelated Kedayan individuals. This article is related to the research paper entitled “Forensic parameters and ancestral fraction in the Kedayan population inferred using 21 autosomal STR loci” [1] where these same data were subjected to ancestry and forensic analyses. We have collected 200 blood samples consisting of 128 male and 72 female volunteer representatives from Kedayan people residing in various parts of Borneo. All 23 STR loci were simultaneously amplified using Globalfiler™ Express PCR and amplicons were separated using an ABI 3500xl Genetic Analyzer. The STR allele calls at each locus were called using GeneMapper(Ⓡ) ID-X Software v1.4, while several algorithms in Arlequin software version 3.5 were used to estimate Hardy–Weinberg equilibrium (HWE) and linkage disequilibrium (LD) between pairs of STR loci. |
format | Online Article Text |
id | pubmed-7334294 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-73342942020-07-07 Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia Hakim, Hashom Mohd Khan, Hussein Omar Ismail, Siti Afifah Lalung, Japareng Kofi, Abban Edward Abdullah, Mohd Tajuddin Chambers, Geoffrey Keith Edinur, Hisham Atan Data Brief Biochemistry, Genetics and Molecular Biology This data article provides population frequencies for 21 autosomal and two sex determining short tandem repeat (STR) loci in unrelated Kedayan individuals. This article is related to the research paper entitled “Forensic parameters and ancestral fraction in the Kedayan population inferred using 21 autosomal STR loci” [1] where these same data were subjected to ancestry and forensic analyses. We have collected 200 blood samples consisting of 128 male and 72 female volunteer representatives from Kedayan people residing in various parts of Borneo. All 23 STR loci were simultaneously amplified using Globalfiler™ Express PCR and amplicons were separated using an ABI 3500xl Genetic Analyzer. The STR allele calls at each locus were called using GeneMapper(Ⓡ) ID-X Software v1.4, while several algorithms in Arlequin software version 3.5 were used to estimate Hardy–Weinberg equilibrium (HWE) and linkage disequilibrium (LD) between pairs of STR loci. Elsevier 2020-06-21 /pmc/articles/PMC7334294/ /pubmed/32642519 http://dx.doi.org/10.1016/j.dib.2020.105909 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Biochemistry, Genetics and Molecular Biology Hakim, Hashom Mohd Khan, Hussein Omar Ismail, Siti Afifah Lalung, Japareng Kofi, Abban Edward Abdullah, Mohd Tajuddin Chambers, Geoffrey Keith Edinur, Hisham Atan Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title | Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title_full | Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title_fullStr | Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title_full_unstemmed | Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title_short | Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title_sort | dataset on 21 autosomal and two sex determining short tandem repeat loci in the kedayan population in borneo, malaysia |
topic | Biochemistry, Genetics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334294/ https://www.ncbi.nlm.nih.gov/pubmed/32642519 http://dx.doi.org/10.1016/j.dib.2020.105909 |
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