Cargando…

Systematic Analysis of the Aberrances and Functional Implications of Ferroptosis in Cancer

Ferroptosis is a type of cell death related to cancer; however, the characteristics of ferroptosis in cancers are still uncertain. Based on the data in The Cancer Genome Atlas, we found that most ferroptosis regulator genes (FRGs) were differentially expressed in tumors, somatic copy number alterati...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Zekun, Zhao, Qi, Zuo, Zhi-Xiang, Yuan, Shu-Qiang, Yu, Kai, Zhang, Qingfeng, Zhang, Xiaolong, Sheng, Hui, Ju, Huai-Qiang, Cheng, Han, Wang, Feng, Xu, Rui-Hua, Liu, Ze-Xian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334617/
https://www.ncbi.nlm.nih.gov/pubmed/32629423
http://dx.doi.org/10.1016/j.isci.2020.101302
_version_ 1783553963704975360
author Liu, Zekun
Zhao, Qi
Zuo, Zhi-Xiang
Yuan, Shu-Qiang
Yu, Kai
Zhang, Qingfeng
Zhang, Xiaolong
Sheng, Hui
Ju, Huai-Qiang
Cheng, Han
Wang, Feng
Xu, Rui-Hua
Liu, Ze-Xian
author_facet Liu, Zekun
Zhao, Qi
Zuo, Zhi-Xiang
Yuan, Shu-Qiang
Yu, Kai
Zhang, Qingfeng
Zhang, Xiaolong
Sheng, Hui
Ju, Huai-Qiang
Cheng, Han
Wang, Feng
Xu, Rui-Hua
Liu, Ze-Xian
author_sort Liu, Zekun
collection PubMed
description Ferroptosis is a type of cell death related to cancer; however, the characteristics of ferroptosis in cancers are still uncertain. Based on the data in The Cancer Genome Atlas, we found that most ferroptosis regulator genes (FRGs) were differentially expressed in tumors, somatic copy number alterations (SCNA) and DNA methylation contributed to their aberrant expression. We established the ferroptosis potential index (FPI) to reveal the functional roles of ferroptosis and noticed that the FPI was higher in tumors than in normal tissues in most cancers and was associated with subtypes and clinical features. The FPI was negatively correlated with several metabolic pathways but positively associated with several important metastasis-related pathways and immune-related pathways. High FPI predicted poor prognosis in several tumors, whereas FPI and FRGs impacted drug sensitivity. Our study presents a systematic analysis of ferroptosis and its regulatory genes and highlights the potential of ferroptosis-based cancer therapy.
format Online
Article
Text
id pubmed-7334617
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-73346172020-07-07 Systematic Analysis of the Aberrances and Functional Implications of Ferroptosis in Cancer Liu, Zekun Zhao, Qi Zuo, Zhi-Xiang Yuan, Shu-Qiang Yu, Kai Zhang, Qingfeng Zhang, Xiaolong Sheng, Hui Ju, Huai-Qiang Cheng, Han Wang, Feng Xu, Rui-Hua Liu, Ze-Xian iScience Article Ferroptosis is a type of cell death related to cancer; however, the characteristics of ferroptosis in cancers are still uncertain. Based on the data in The Cancer Genome Atlas, we found that most ferroptosis regulator genes (FRGs) were differentially expressed in tumors, somatic copy number alterations (SCNA) and DNA methylation contributed to their aberrant expression. We established the ferroptosis potential index (FPI) to reveal the functional roles of ferroptosis and noticed that the FPI was higher in tumors than in normal tissues in most cancers and was associated with subtypes and clinical features. The FPI was negatively correlated with several metabolic pathways but positively associated with several important metastasis-related pathways and immune-related pathways. High FPI predicted poor prognosis in several tumors, whereas FPI and FRGs impacted drug sensitivity. Our study presents a systematic analysis of ferroptosis and its regulatory genes and highlights the potential of ferroptosis-based cancer therapy. Elsevier 2020-06-20 /pmc/articles/PMC7334617/ /pubmed/32629423 http://dx.doi.org/10.1016/j.isci.2020.101302 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Liu, Zekun
Zhao, Qi
Zuo, Zhi-Xiang
Yuan, Shu-Qiang
Yu, Kai
Zhang, Qingfeng
Zhang, Xiaolong
Sheng, Hui
Ju, Huai-Qiang
Cheng, Han
Wang, Feng
Xu, Rui-Hua
Liu, Ze-Xian
Systematic Analysis of the Aberrances and Functional Implications of Ferroptosis in Cancer
title Systematic Analysis of the Aberrances and Functional Implications of Ferroptosis in Cancer
title_full Systematic Analysis of the Aberrances and Functional Implications of Ferroptosis in Cancer
title_fullStr Systematic Analysis of the Aberrances and Functional Implications of Ferroptosis in Cancer
title_full_unstemmed Systematic Analysis of the Aberrances and Functional Implications of Ferroptosis in Cancer
title_short Systematic Analysis of the Aberrances and Functional Implications of Ferroptosis in Cancer
title_sort systematic analysis of the aberrances and functional implications of ferroptosis in cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334617/
https://www.ncbi.nlm.nih.gov/pubmed/32629423
http://dx.doi.org/10.1016/j.isci.2020.101302
work_keys_str_mv AT liuzekun systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT zhaoqi systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT zuozhixiang systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT yuanshuqiang systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT yukai systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT zhangqingfeng systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT zhangxiaolong systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT shenghui systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT juhuaiqiang systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT chenghan systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT wangfeng systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT xuruihua systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer
AT liuzexian systematicanalysisoftheaberrancesandfunctionalimplicationsofferroptosisincancer