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Intermolecular interactions and disorder in six isostructural celecoxib solvates
Six isostructural crystalline solvates of the active pharmaceutical ingredient celecoxib {4-[5-(4-methylphenyl)-3-(trifluoromethyl)pyrazol-1-yl]benzenesulfonamide; C(17)H(14)F(3)N(3)O(2)S} are described, containing dimethylformamide (DMF, C(3)H(7)NO, 1), dimethylacetamide (DMA, C(4)H(9)...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7336170/ https://www.ncbi.nlm.nih.gov/pubmed/32624509 http://dx.doi.org/10.1107/S2053229620008359 |
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author | Bond, Andrew D. Sun, Changquan C. |
author_facet | Bond, Andrew D. Sun, Changquan C. |
author_sort | Bond, Andrew D. |
collection | PubMed |
description | Six isostructural crystalline solvates of the active pharmaceutical ingredient celecoxib {4-[5-(4-methylphenyl)-3-(trifluoromethyl)pyrazol-1-yl]benzenesulfonamide; C(17)H(14)F(3)N(3)O(2)S} are described, containing dimethylformamide (DMF, C(3)H(7)NO, 1), dimethylacetamide (DMA, C(4)H(9)NO, 2), N-methylpyrrolidin-2-one (NMP, C(5)H(9)NO, 3), tetramethylurea (TMU, C(5)H(12)N(2)O, 4), 1,3-dimethyl-3,4,5,6-tetrahydropyrimidin-2(1H)-one (DMPU, C(6)H(12)N(2)O, 5) or dimethyl sulfoxide (DMSO, C(2)H(6)OS, 6). The host celecoxib structure contains one-dimensional channel voids accommodating the solvent molecules, which accept hydrogen bonds from the NH(2) groups of two celecoxib molecules. The solvent binding sites have local twofold rotation symmetry, which is consistent with the point symmetry of the solvent molecule in 4 and 5, but introduces orientational disorder for the solvent molecules in 1, 2, 3 and 6. Despite the isostructurality of 1–6, the unit-cell volume and solvent-accessible void space show significant variation. In particular, 4 and 5 show an enlarged and skewed unit cell, which can be attributed to a specific interaction between an N—CH(3) group in the solvent molecule and the toluene group of celecoxib. Intermolecular interaction energies calculated using the PIXEL method show that the total interaction energy between the celecoxib and solvent molecules is broadly correlated with the molecular volume of the solvent, except in 6, where the increased polarity of the S=O bond leads to greater overall stabilization compared to the similarly-sized DMF molecule in 1. In the structures showing disorder, the most stable orientations of the solvent molecules make C—H⋯O contacts to the S=O groups of celecoxib. |
format | Online Article Text |
id | pubmed-7336170 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-73361702020-07-17 Intermolecular interactions and disorder in six isostructural celecoxib solvates Bond, Andrew D. Sun, Changquan C. Acta Crystallogr C Struct Chem Research Papers Six isostructural crystalline solvates of the active pharmaceutical ingredient celecoxib {4-[5-(4-methylphenyl)-3-(trifluoromethyl)pyrazol-1-yl]benzenesulfonamide; C(17)H(14)F(3)N(3)O(2)S} are described, containing dimethylformamide (DMF, C(3)H(7)NO, 1), dimethylacetamide (DMA, C(4)H(9)NO, 2), N-methylpyrrolidin-2-one (NMP, C(5)H(9)NO, 3), tetramethylurea (TMU, C(5)H(12)N(2)O, 4), 1,3-dimethyl-3,4,5,6-tetrahydropyrimidin-2(1H)-one (DMPU, C(6)H(12)N(2)O, 5) or dimethyl sulfoxide (DMSO, C(2)H(6)OS, 6). The host celecoxib structure contains one-dimensional channel voids accommodating the solvent molecules, which accept hydrogen bonds from the NH(2) groups of two celecoxib molecules. The solvent binding sites have local twofold rotation symmetry, which is consistent with the point symmetry of the solvent molecule in 4 and 5, but introduces orientational disorder for the solvent molecules in 1, 2, 3 and 6. Despite the isostructurality of 1–6, the unit-cell volume and solvent-accessible void space show significant variation. In particular, 4 and 5 show an enlarged and skewed unit cell, which can be attributed to a specific interaction between an N—CH(3) group in the solvent molecule and the toluene group of celecoxib. Intermolecular interaction energies calculated using the PIXEL method show that the total interaction energy between the celecoxib and solvent molecules is broadly correlated with the molecular volume of the solvent, except in 6, where the increased polarity of the S=O bond leads to greater overall stabilization compared to the similarly-sized DMF molecule in 1. In the structures showing disorder, the most stable orientations of the solvent molecules make C—H⋯O contacts to the S=O groups of celecoxib. International Union of Crystallography 2020-06-27 /pmc/articles/PMC7336170/ /pubmed/32624509 http://dx.doi.org/10.1107/S2053229620008359 Text en © Bond and Sun 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Papers Bond, Andrew D. Sun, Changquan C. Intermolecular interactions and disorder in six isostructural celecoxib solvates |
title | Intermolecular interactions and disorder in six isostructural celecoxib solvates |
title_full | Intermolecular interactions and disorder in six isostructural celecoxib solvates |
title_fullStr | Intermolecular interactions and disorder in six isostructural celecoxib solvates |
title_full_unstemmed | Intermolecular interactions and disorder in six isostructural celecoxib solvates |
title_short | Intermolecular interactions and disorder in six isostructural celecoxib solvates |
title_sort | intermolecular interactions and disorder in six isostructural celecoxib solvates |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7336170/ https://www.ncbi.nlm.nih.gov/pubmed/32624509 http://dx.doi.org/10.1107/S2053229620008359 |
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