Cargando…

4-[(1E)-({[(Benzyl­sulfan­yl)methane­thio­yl]amino}­imino)­meth­yl]benzene-1,3-diol chloro­form hemisolvate: crystal structure, Hirshfeld surface analysis and computational study

The title hydrazine carbodi­thio­ate chloro­form hemisolvate, 2C(15)H(14)N(2)O(2)S(2)·CHCl(3), comprises two independent hydrazine carbodi­thio­ate mol­ecules, A and B, and a chloro­form mol­ecule; the latter is statistically disordered about its mol­ecular threefold axis. The common features of the...

Descripción completa

Detalles Bibliográficos
Autores principales: Khairuanuar, Nadia Liyana, Crouse, Karen A., Kwong, Huey Chong, Tan, Sang Loon, Tiekink, Edward R. T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7336803/
https://www.ncbi.nlm.nih.gov/pubmed/32695439
http://dx.doi.org/10.1107/S2056989020007070
_version_ 1783554394833289216
author Khairuanuar, Nadia Liyana
Crouse, Karen A.
Kwong, Huey Chong
Tan, Sang Loon
Tiekink, Edward R. T.
author_facet Khairuanuar, Nadia Liyana
Crouse, Karen A.
Kwong, Huey Chong
Tan, Sang Loon
Tiekink, Edward R. T.
author_sort Khairuanuar, Nadia Liyana
collection PubMed
description The title hydrazine carbodi­thio­ate chloro­form hemisolvate, 2C(15)H(14)N(2)O(2)S(2)·CHCl(3), comprises two independent hydrazine carbodi­thio­ate mol­ecules, A and B, and a chloro­form mol­ecule; the latter is statistically disordered about its mol­ecular threefold axis. The common features of the organic mol­ecules include an almost planar, central CN(2)S(2) chromophore [r.m.s. deviation = 0.0203 Å (A) and 0.0080 Å (B)], an E configuration about the imine bond and an intra­molecular hydroxyl-O—H⋯N(imine) hydrogen bond. The major conformational difference between the mol­ecules is seen in the relative dispositions of the phenyl rings as indicated by the values of the dihedral angles between the central plane and phenyl ring of 71.21 (6)° (A) and 54.73 (7)° (B). Finally, a difference is seen in the disposition of the outer hydroxyl-H atoms, having opposite relative orientations. In the calculated gas-phase structure, the entire mol­ecule is planar with the exception of the perpendicular phenyl ring. In the mol­ecular packing, the A and B mol­ecules assemble into a two-mol­ecule aggregate via N—H⋯S hydrogen bonds and eight-membered {⋯HNCS}(2) synthons. The dimeric assemblies are connected into supra­molecular chains via hydroxyl-O—H⋯O(hydrox­yl) hydrogen bonds and these are linked into a double-chain through hy­droxy-O—H⋯π(phen­yl) inter­actions. The double-chains are connected into a three-dimensional architecture through phenyl-C—H⋯O(hydrox­yl) and phenyl-C—H⋯π(phen­yl) inter­actions. The overall assembly defines columns along the a-axis direction in which reside the chloro­form mol­ecules, which are stabilized by chloro­form–methine-C—H⋯S(thione) and phenyl-C—H⋯Cl contacts. The analysis of the calculated Hirshfeld surfaces, non-covalent inter­action plots and inter­action energies confirm the importance of the above-mentioned inter­actions, but also of cooperative, non-standard inter­actions such as π(benzene)⋯π(hydrogen-bond-mediated-ring) contacts.
format Online
Article
Text
id pubmed-7336803
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-73368032020-07-20 4-[(1E)-({[(Benzyl­sulfan­yl)methane­thio­yl]amino}­imino)­meth­yl]benzene-1,3-diol chloro­form hemisolvate: crystal structure, Hirshfeld surface analysis and computational study Khairuanuar, Nadia Liyana Crouse, Karen A. Kwong, Huey Chong Tan, Sang Loon Tiekink, Edward R. T. Acta Crystallogr E Crystallogr Commun Research Communications The title hydrazine carbodi­thio­ate chloro­form hemisolvate, 2C(15)H(14)N(2)O(2)S(2)·CHCl(3), comprises two independent hydrazine carbodi­thio­ate mol­ecules, A and B, and a chloro­form mol­ecule; the latter is statistically disordered about its mol­ecular threefold axis. The common features of the organic mol­ecules include an almost planar, central CN(2)S(2) chromophore [r.m.s. deviation = 0.0203 Å (A) and 0.0080 Å (B)], an E configuration about the imine bond and an intra­molecular hydroxyl-O—H⋯N(imine) hydrogen bond. The major conformational difference between the mol­ecules is seen in the relative dispositions of the phenyl rings as indicated by the values of the dihedral angles between the central plane and phenyl ring of 71.21 (6)° (A) and 54.73 (7)° (B). Finally, a difference is seen in the disposition of the outer hydroxyl-H atoms, having opposite relative orientations. In the calculated gas-phase structure, the entire mol­ecule is planar with the exception of the perpendicular phenyl ring. In the mol­ecular packing, the A and B mol­ecules assemble into a two-mol­ecule aggregate via N—H⋯S hydrogen bonds and eight-membered {⋯HNCS}(2) synthons. The dimeric assemblies are connected into supra­molecular chains via hydroxyl-O—H⋯O(hydrox­yl) hydrogen bonds and these are linked into a double-chain through hy­droxy-O—H⋯π(phen­yl) inter­actions. The double-chains are connected into a three-dimensional architecture through phenyl-C—H⋯O(hydrox­yl) and phenyl-C—H⋯π(phen­yl) inter­actions. The overall assembly defines columns along the a-axis direction in which reside the chloro­form mol­ecules, which are stabilized by chloro­form–methine-C—H⋯S(thione) and phenyl-C—H⋯Cl contacts. The analysis of the calculated Hirshfeld surfaces, non-covalent inter­action plots and inter­action energies confirm the importance of the above-mentioned inter­actions, but also of cooperative, non-standard inter­actions such as π(benzene)⋯π(hydrogen-bond-mediated-ring) contacts. International Union of Crystallography 2020-06-02 /pmc/articles/PMC7336803/ /pubmed/32695439 http://dx.doi.org/10.1107/S2056989020007070 Text en © Khairuanuar et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Khairuanuar, Nadia Liyana
Crouse, Karen A.
Kwong, Huey Chong
Tan, Sang Loon
Tiekink, Edward R. T.
4-[(1E)-({[(Benzyl­sulfan­yl)methane­thio­yl]amino}­imino)­meth­yl]benzene-1,3-diol chloro­form hemisolvate: crystal structure, Hirshfeld surface analysis and computational study
title 4-[(1E)-({[(Benzyl­sulfan­yl)methane­thio­yl]amino}­imino)­meth­yl]benzene-1,3-diol chloro­form hemisolvate: crystal structure, Hirshfeld surface analysis and computational study
title_full 4-[(1E)-({[(Benzyl­sulfan­yl)methane­thio­yl]amino}­imino)­meth­yl]benzene-1,3-diol chloro­form hemisolvate: crystal structure, Hirshfeld surface analysis and computational study
title_fullStr 4-[(1E)-({[(Benzyl­sulfan­yl)methane­thio­yl]amino}­imino)­meth­yl]benzene-1,3-diol chloro­form hemisolvate: crystal structure, Hirshfeld surface analysis and computational study
title_full_unstemmed 4-[(1E)-({[(Benzyl­sulfan­yl)methane­thio­yl]amino}­imino)­meth­yl]benzene-1,3-diol chloro­form hemisolvate: crystal structure, Hirshfeld surface analysis and computational study
title_short 4-[(1E)-({[(Benzyl­sulfan­yl)methane­thio­yl]amino}­imino)­meth­yl]benzene-1,3-diol chloro­form hemisolvate: crystal structure, Hirshfeld surface analysis and computational study
title_sort 4-[(1e)-({[(benzyl­sulfan­yl)methane­thio­yl]amino}­imino)­meth­yl]benzene-1,3-diol chloro­form hemisolvate: crystal structure, hirshfeld surface analysis and computational study
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7336803/
https://www.ncbi.nlm.nih.gov/pubmed/32695439
http://dx.doi.org/10.1107/S2056989020007070
work_keys_str_mv AT khairuanuarnadialiyana 41ebenzylsulfanylmethanethioylaminoiminomethylbenzene13diolchloroformhemisolvatecrystalstructurehirshfeldsurfaceanalysisandcomputationalstudy
AT crousekarena 41ebenzylsulfanylmethanethioylaminoiminomethylbenzene13diolchloroformhemisolvatecrystalstructurehirshfeldsurfaceanalysisandcomputationalstudy
AT kwonghueychong 41ebenzylsulfanylmethanethioylaminoiminomethylbenzene13diolchloroformhemisolvatecrystalstructurehirshfeldsurfaceanalysisandcomputationalstudy
AT tansangloon 41ebenzylsulfanylmethanethioylaminoiminomethylbenzene13diolchloroformhemisolvatecrystalstructurehirshfeldsurfaceanalysisandcomputationalstudy
AT tiekinkedwardrt 41ebenzylsulfanylmethanethioylaminoiminomethylbenzene13diolchloroformhemisolvatecrystalstructurehirshfeldsurfaceanalysisandcomputationalstudy