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4-[(1E)-({[(Benzylsulfanyl)methanethioyl]amino}imino)methyl]benzene-1,3-diol chloroform hemisolvate: crystal structure, Hirshfeld surface analysis and computational study
The title hydrazine carbodithioate chloroform hemisolvate, 2C(15)H(14)N(2)O(2)S(2)·CHCl(3), comprises two independent hydrazine carbodithioate molecules, A and B, and a chloroform molecule; the latter is statistically disordered about its molecular threefold axis. The common features of the...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7336803/ https://www.ncbi.nlm.nih.gov/pubmed/32695439 http://dx.doi.org/10.1107/S2056989020007070 |
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author | Khairuanuar, Nadia Liyana Crouse, Karen A. Kwong, Huey Chong Tan, Sang Loon Tiekink, Edward R. T. |
author_facet | Khairuanuar, Nadia Liyana Crouse, Karen A. Kwong, Huey Chong Tan, Sang Loon Tiekink, Edward R. T. |
author_sort | Khairuanuar, Nadia Liyana |
collection | PubMed |
description | The title hydrazine carbodithioate chloroform hemisolvate, 2C(15)H(14)N(2)O(2)S(2)·CHCl(3), comprises two independent hydrazine carbodithioate molecules, A and B, and a chloroform molecule; the latter is statistically disordered about its molecular threefold axis. The common features of the organic molecules include an almost planar, central CN(2)S(2) chromophore [r.m.s. deviation = 0.0203 Å (A) and 0.0080 Å (B)], an E configuration about the imine bond and an intramolecular hydroxyl-O—H⋯N(imine) hydrogen bond. The major conformational difference between the molecules is seen in the relative dispositions of the phenyl rings as indicated by the values of the dihedral angles between the central plane and phenyl ring of 71.21 (6)° (A) and 54.73 (7)° (B). Finally, a difference is seen in the disposition of the outer hydroxyl-H atoms, having opposite relative orientations. In the calculated gas-phase structure, the entire molecule is planar with the exception of the perpendicular phenyl ring. In the molecular packing, the A and B molecules assemble into a two-molecule aggregate via N—H⋯S hydrogen bonds and eight-membered {⋯HNCS}(2) synthons. The dimeric assemblies are connected into supramolecular chains via hydroxyl-O—H⋯O(hydroxyl) hydrogen bonds and these are linked into a double-chain through hydroxy-O—H⋯π(phenyl) interactions. The double-chains are connected into a three-dimensional architecture through phenyl-C—H⋯O(hydroxyl) and phenyl-C—H⋯π(phenyl) interactions. The overall assembly defines columns along the a-axis direction in which reside the chloroform molecules, which are stabilized by chloroform–methine-C—H⋯S(thione) and phenyl-C—H⋯Cl contacts. The analysis of the calculated Hirshfeld surfaces, non-covalent interaction plots and interaction energies confirm the importance of the above-mentioned interactions, but also of cooperative, non-standard interactions such as π(benzene)⋯π(hydrogen-bond-mediated-ring) contacts. |
format | Online Article Text |
id | pubmed-7336803 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-73368032020-07-20 4-[(1E)-({[(Benzylsulfanyl)methanethioyl]amino}imino)methyl]benzene-1,3-diol chloroform hemisolvate: crystal structure, Hirshfeld surface analysis and computational study Khairuanuar, Nadia Liyana Crouse, Karen A. Kwong, Huey Chong Tan, Sang Loon Tiekink, Edward R. T. Acta Crystallogr E Crystallogr Commun Research Communications The title hydrazine carbodithioate chloroform hemisolvate, 2C(15)H(14)N(2)O(2)S(2)·CHCl(3), comprises two independent hydrazine carbodithioate molecules, A and B, and a chloroform molecule; the latter is statistically disordered about its molecular threefold axis. The common features of the organic molecules include an almost planar, central CN(2)S(2) chromophore [r.m.s. deviation = 0.0203 Å (A) and 0.0080 Å (B)], an E configuration about the imine bond and an intramolecular hydroxyl-O—H⋯N(imine) hydrogen bond. The major conformational difference between the molecules is seen in the relative dispositions of the phenyl rings as indicated by the values of the dihedral angles between the central plane and phenyl ring of 71.21 (6)° (A) and 54.73 (7)° (B). Finally, a difference is seen in the disposition of the outer hydroxyl-H atoms, having opposite relative orientations. In the calculated gas-phase structure, the entire molecule is planar with the exception of the perpendicular phenyl ring. In the molecular packing, the A and B molecules assemble into a two-molecule aggregate via N—H⋯S hydrogen bonds and eight-membered {⋯HNCS}(2) synthons. The dimeric assemblies are connected into supramolecular chains via hydroxyl-O—H⋯O(hydroxyl) hydrogen bonds and these are linked into a double-chain through hydroxy-O—H⋯π(phenyl) interactions. The double-chains are connected into a three-dimensional architecture through phenyl-C—H⋯O(hydroxyl) and phenyl-C—H⋯π(phenyl) interactions. The overall assembly defines columns along the a-axis direction in which reside the chloroform molecules, which are stabilized by chloroform–methine-C—H⋯S(thione) and phenyl-C—H⋯Cl contacts. The analysis of the calculated Hirshfeld surfaces, non-covalent interaction plots and interaction energies confirm the importance of the above-mentioned interactions, but also of cooperative, non-standard interactions such as π(benzene)⋯π(hydrogen-bond-mediated-ring) contacts. International Union of Crystallography 2020-06-02 /pmc/articles/PMC7336803/ /pubmed/32695439 http://dx.doi.org/10.1107/S2056989020007070 Text en © Khairuanuar et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Communications Khairuanuar, Nadia Liyana Crouse, Karen A. Kwong, Huey Chong Tan, Sang Loon Tiekink, Edward R. T. 4-[(1E)-({[(Benzylsulfanyl)methanethioyl]amino}imino)methyl]benzene-1,3-diol chloroform hemisolvate: crystal structure, Hirshfeld surface analysis and computational study |
title | 4-[(1E)-({[(Benzylsulfanyl)methanethioyl]amino}imino)methyl]benzene-1,3-diol chloroform hemisolvate: crystal structure, Hirshfeld surface analysis and computational study |
title_full | 4-[(1E)-({[(Benzylsulfanyl)methanethioyl]amino}imino)methyl]benzene-1,3-diol chloroform hemisolvate: crystal structure, Hirshfeld surface analysis and computational study |
title_fullStr | 4-[(1E)-({[(Benzylsulfanyl)methanethioyl]amino}imino)methyl]benzene-1,3-diol chloroform hemisolvate: crystal structure, Hirshfeld surface analysis and computational study |
title_full_unstemmed | 4-[(1E)-({[(Benzylsulfanyl)methanethioyl]amino}imino)methyl]benzene-1,3-diol chloroform hemisolvate: crystal structure, Hirshfeld surface analysis and computational study |
title_short | 4-[(1E)-({[(Benzylsulfanyl)methanethioyl]amino}imino)methyl]benzene-1,3-diol chloroform hemisolvate: crystal structure, Hirshfeld surface analysis and computational study |
title_sort | 4-[(1e)-({[(benzylsulfanyl)methanethioyl]amino}imino)methyl]benzene-1,3-diol chloroform hemisolvate: crystal structure, hirshfeld surface analysis and computational study |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7336803/ https://www.ncbi.nlm.nih.gov/pubmed/32695439 http://dx.doi.org/10.1107/S2056989020007070 |
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