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Immune and Clinical Features of CD96 Expression in Glioma by in silico Analysis
BACKGROUND: Immune checkpoints target regulatory pathways in T cells that enhance antitumor immune responses and elicit durable clinical responses. As a novel immune checkpoint, CD96 is an attractive key target for cancer immunotherapy. However, there has been no integrative investigation of CD96 in...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7338376/ https://www.ncbi.nlm.nih.gov/pubmed/32695752 http://dx.doi.org/10.3389/fbioe.2020.00592 |
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author | Zhang, Qiang Zhong, Hua Fan, Yinchun Liu, Qian Song, Jiancheng Yao, Shengtao Cao, Fang |
author_facet | Zhang, Qiang Zhong, Hua Fan, Yinchun Liu, Qian Song, Jiancheng Yao, Shengtao Cao, Fang |
author_sort | Zhang, Qiang |
collection | PubMed |
description | BACKGROUND: Immune checkpoints target regulatory pathways in T cells that enhance antitumor immune responses and elicit durable clinical responses. As a novel immune checkpoint, CD96 is an attractive key target for cancer immunotherapy. However, there has been no integrative investigation of CD96 in glioma. Our study explored the relationship between CD96 expression and clinical prognosis in glioma. METHODS: RNA and clinical data for a total of 1,001 samples were included in this study, including 325 samples from the Chinese Glioma Genome Atlas (CGGA) database and 676 samples from The Cancer Genome Atlas (TCGA) dataset. The R programming language was employed to perform statistical analysis and draw figures. RESULTS: CD96 had a consistently positive relationship with glioblastoma and was highly enriched in IDH-wildtype and mesenchymal subtype glioma. Gene ontology enrichment and gene set variation analysis analyses suggested that CD96 was mostly involved in immune functions and was especially related to T cell-mediated immune response in glioma. Subsequent immune infiltration analysis showed that CD96 was positively correlated with infiltrating levels of CD4 + T and CD8 + T cells, macrophages, neutrophils, and DCs in glioblastoma multiforme and low-grade glioma. Additionally, CD96 was tightly associated with other immune checkpoints, including PD-1, CTLA-4, TIGIT, and TIM-3. Univariate and multivariate Cox analysis demonstrated that CD96 acts as an independent indicator of poor prognosis in glioma. CONCLUSION: CD96 expression was increased in malignant phenotype and negatively associated with overall survival in glioma. CD96 also showed a positive correlation with other immune checkpoints, immune response, and inflammatory activity. Our findings indicate that CD96 is a promising clinical target for further immunotherapeutic use in glioma patients. |
format | Online Article Text |
id | pubmed-7338376 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-73383762020-07-20 Immune and Clinical Features of CD96 Expression in Glioma by in silico Analysis Zhang, Qiang Zhong, Hua Fan, Yinchun Liu, Qian Song, Jiancheng Yao, Shengtao Cao, Fang Front Bioeng Biotechnol Bioengineering and Biotechnology BACKGROUND: Immune checkpoints target regulatory pathways in T cells that enhance antitumor immune responses and elicit durable clinical responses. As a novel immune checkpoint, CD96 is an attractive key target for cancer immunotherapy. However, there has been no integrative investigation of CD96 in glioma. Our study explored the relationship between CD96 expression and clinical prognosis in glioma. METHODS: RNA and clinical data for a total of 1,001 samples were included in this study, including 325 samples from the Chinese Glioma Genome Atlas (CGGA) database and 676 samples from The Cancer Genome Atlas (TCGA) dataset. The R programming language was employed to perform statistical analysis and draw figures. RESULTS: CD96 had a consistently positive relationship with glioblastoma and was highly enriched in IDH-wildtype and mesenchymal subtype glioma. Gene ontology enrichment and gene set variation analysis analyses suggested that CD96 was mostly involved in immune functions and was especially related to T cell-mediated immune response in glioma. Subsequent immune infiltration analysis showed that CD96 was positively correlated with infiltrating levels of CD4 + T and CD8 + T cells, macrophages, neutrophils, and DCs in glioblastoma multiforme and low-grade glioma. Additionally, CD96 was tightly associated with other immune checkpoints, including PD-1, CTLA-4, TIGIT, and TIM-3. Univariate and multivariate Cox analysis demonstrated that CD96 acts as an independent indicator of poor prognosis in glioma. CONCLUSION: CD96 expression was increased in malignant phenotype and negatively associated with overall survival in glioma. CD96 also showed a positive correlation with other immune checkpoints, immune response, and inflammatory activity. Our findings indicate that CD96 is a promising clinical target for further immunotherapeutic use in glioma patients. Frontiers Media S.A. 2020-06-30 /pmc/articles/PMC7338376/ /pubmed/32695752 http://dx.doi.org/10.3389/fbioe.2020.00592 Text en Copyright © 2020 Zhang, Zhong, Fan, Liu, Song, Yao and Cao. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Bioengineering and Biotechnology Zhang, Qiang Zhong, Hua Fan, Yinchun Liu, Qian Song, Jiancheng Yao, Shengtao Cao, Fang Immune and Clinical Features of CD96 Expression in Glioma by in silico Analysis |
title | Immune and Clinical Features of CD96 Expression in Glioma by in silico Analysis |
title_full | Immune and Clinical Features of CD96 Expression in Glioma by in silico Analysis |
title_fullStr | Immune and Clinical Features of CD96 Expression in Glioma by in silico Analysis |
title_full_unstemmed | Immune and Clinical Features of CD96 Expression in Glioma by in silico Analysis |
title_short | Immune and Clinical Features of CD96 Expression in Glioma by in silico Analysis |
title_sort | immune and clinical features of cd96 expression in glioma by in silico analysis |
topic | Bioengineering and Biotechnology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7338376/ https://www.ncbi.nlm.nih.gov/pubmed/32695752 http://dx.doi.org/10.3389/fbioe.2020.00592 |
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