Cargando…
Proteomic Signatures of Healthy Intervertebral Discs From Organ Donors: A Comparison With Previous Studies on Discs From Scoliosis, Animals, and Trauma
OBJECTIVE: To catalog and characterize the proteome of normal human intervertebral disc (IVD). METHODS: Nine magnetic resonance imaging (MRI) normal IVDs were harvested from 9 different brain dead yet alive voluntary organ donors and were subjected to electrospray ionization-liquid chromatography ta...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Spinal Neurosurgery Society
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7338947/ https://www.ncbi.nlm.nih.gov/pubmed/32615701 http://dx.doi.org/10.14245/ns.2040056.028 |
_version_ | 1783554791055556608 |
---|---|
author | Rajasekaran, Shanmuganathan Tangavel, Chitraa Soundararajan, Dilip Chand Raja Nayagam, Sharon Miracle Matchado, Monica Steffi Muthurajan, Raveendran Anand, K.S. Sri Vijay Rajendran, Sunmathi Shetty, Ajoy Prasad Kanna, Rishi Mugesh Kuppamuthu, Dharmalingam |
author_facet | Rajasekaran, Shanmuganathan Tangavel, Chitraa Soundararajan, Dilip Chand Raja Nayagam, Sharon Miracle Matchado, Monica Steffi Muthurajan, Raveendran Anand, K.S. Sri Vijay Rajendran, Sunmathi Shetty, Ajoy Prasad Kanna, Rishi Mugesh Kuppamuthu, Dharmalingam |
author_sort | Rajasekaran, Shanmuganathan |
collection | PubMed |
description | OBJECTIVE: To catalog and characterize the proteome of normal human intervertebral disc (IVD). METHODS: Nine magnetic resonance imaging (MRI) normal IVDs were harvested from 9 different brain dead yet alive voluntary organ donors and were subjected to electrospray ionization-liquid chromatography tandem mass spectrometry (ESI-LC-MS/MS) acquisition. RESULTS: A total of 1,116 proteins were identified. Functional enrichment analysis tool DAVID ver. 6.8 categorized: extracellular proteins (38%), intracellular (31%), protein-containing complex (13%), organelle (9%), membrane proteins (6%), supramolecular complex (2%), and 1% in the cell junction. Molecular function revealed: binding activity (42%), catalytic activity (31%), regulatory activity (14%), and structural activity (7%). Molecular transducer, transporter, and transcription regulator activity together contributed to 6%. A comparison of the proteins obtained from this study to others in the literature showed a wide variation in content with only 3% of bovine, 5% of murine, 54% of human scoliotic discs, and 10.2% of discs adjacent to lumbar burst fractures common to our study of organ donors. Between proteins reported in scoliosis and lumbar fracture patients, only 13.51% were common, further signifying the contrast amongst the various MRI normal IVD samples. CONCLUSION: The proteome of “healthy” human IVDs has been defined, and our results show that proteomic data on IVDs obtained from scoliosis, fracture patients, and cadavers lack normal physiological conditions and should not be used as biological controls despite normal MRI findings. This questions the validity of previous studies that have used such discs as controls for analyzing the pathomechanisms of disc degeneration. |
format | Online Article Text |
id | pubmed-7338947 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Korean Spinal Neurosurgery Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-73389472020-07-20 Proteomic Signatures of Healthy Intervertebral Discs From Organ Donors: A Comparison With Previous Studies on Discs From Scoliosis, Animals, and Trauma Rajasekaran, Shanmuganathan Tangavel, Chitraa Soundararajan, Dilip Chand Raja Nayagam, Sharon Miracle Matchado, Monica Steffi Muthurajan, Raveendran Anand, K.S. Sri Vijay Rajendran, Sunmathi Shetty, Ajoy Prasad Kanna, Rishi Mugesh Kuppamuthu, Dharmalingam Neurospine Original Article OBJECTIVE: To catalog and characterize the proteome of normal human intervertebral disc (IVD). METHODS: Nine magnetic resonance imaging (MRI) normal IVDs were harvested from 9 different brain dead yet alive voluntary organ donors and were subjected to electrospray ionization-liquid chromatography tandem mass spectrometry (ESI-LC-MS/MS) acquisition. RESULTS: A total of 1,116 proteins were identified. Functional enrichment analysis tool DAVID ver. 6.8 categorized: extracellular proteins (38%), intracellular (31%), protein-containing complex (13%), organelle (9%), membrane proteins (6%), supramolecular complex (2%), and 1% in the cell junction. Molecular function revealed: binding activity (42%), catalytic activity (31%), regulatory activity (14%), and structural activity (7%). Molecular transducer, transporter, and transcription regulator activity together contributed to 6%. A comparison of the proteins obtained from this study to others in the literature showed a wide variation in content with only 3% of bovine, 5% of murine, 54% of human scoliotic discs, and 10.2% of discs adjacent to lumbar burst fractures common to our study of organ donors. Between proteins reported in scoliosis and lumbar fracture patients, only 13.51% were common, further signifying the contrast amongst the various MRI normal IVD samples. CONCLUSION: The proteome of “healthy” human IVDs has been defined, and our results show that proteomic data on IVDs obtained from scoliosis, fracture patients, and cadavers lack normal physiological conditions and should not be used as biological controls despite normal MRI findings. This questions the validity of previous studies that have used such discs as controls for analyzing the pathomechanisms of disc degeneration. Korean Spinal Neurosurgery Society 2020-06 2020-06-30 /pmc/articles/PMC7338947/ /pubmed/32615701 http://dx.doi.org/10.14245/ns.2040056.028 Text en Copyright © 2020 by the Korean Spinal Neurosurgery Society This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Rajasekaran, Shanmuganathan Tangavel, Chitraa Soundararajan, Dilip Chand Raja Nayagam, Sharon Miracle Matchado, Monica Steffi Muthurajan, Raveendran Anand, K.S. Sri Vijay Rajendran, Sunmathi Shetty, Ajoy Prasad Kanna, Rishi Mugesh Kuppamuthu, Dharmalingam Proteomic Signatures of Healthy Intervertebral Discs From Organ Donors: A Comparison With Previous Studies on Discs From Scoliosis, Animals, and Trauma |
title | Proteomic Signatures of Healthy Intervertebral Discs From Organ Donors: A Comparison With Previous Studies on Discs From Scoliosis, Animals, and Trauma |
title_full | Proteomic Signatures of Healthy Intervertebral Discs From Organ Donors: A Comparison With Previous Studies on Discs From Scoliosis, Animals, and Trauma |
title_fullStr | Proteomic Signatures of Healthy Intervertebral Discs From Organ Donors: A Comparison With Previous Studies on Discs From Scoliosis, Animals, and Trauma |
title_full_unstemmed | Proteomic Signatures of Healthy Intervertebral Discs From Organ Donors: A Comparison With Previous Studies on Discs From Scoliosis, Animals, and Trauma |
title_short | Proteomic Signatures of Healthy Intervertebral Discs From Organ Donors: A Comparison With Previous Studies on Discs From Scoliosis, Animals, and Trauma |
title_sort | proteomic signatures of healthy intervertebral discs from organ donors: a comparison with previous studies on discs from scoliosis, animals, and trauma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7338947/ https://www.ncbi.nlm.nih.gov/pubmed/32615701 http://dx.doi.org/10.14245/ns.2040056.028 |
work_keys_str_mv | AT rajasekaranshanmuganathan proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma AT tangavelchitraa proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma AT soundararajandilipchandraja proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma AT nayagamsharonmiracle proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma AT matchadomonicasteffi proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma AT muthurajanraveendran proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma AT anandkssrivijay proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma AT rajendransunmathi proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma AT shettyajoyprasad proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma AT kannarishimugesh proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma AT kuppamuthudharmalingam proteomicsignaturesofhealthyintervertebraldiscsfromorgandonorsacomparisonwithpreviousstudiesondiscsfromscoliosisanimalsandtrauma |