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Prognostic Value and Immune Infiltrates of ABCA8 and FABP4 in Stomach Adenocarcinoma

BACKGROUND: Stomach adenocarcinoma (STAD) is a common malignancy worldwide with poor prognosis. Therefore, it is important to identify a valuable prognostic biomarker for STAD. The aim of present study was to identify novel prognostic biomarkers for STAD and evaluate the potential role of hub genes...

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Autores principales: Guo, Ya, Wang, Zhong Wei, Su, Wang Hui, Chen, Jing, Wang, Ya Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7338980/
https://www.ncbi.nlm.nih.gov/pubmed/32685482
http://dx.doi.org/10.1155/2020/4145164
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author Guo, Ya
Wang, Zhong Wei
Su, Wang Hui
Chen, Jing
Wang, Ya Li
author_facet Guo, Ya
Wang, Zhong Wei
Su, Wang Hui
Chen, Jing
Wang, Ya Li
author_sort Guo, Ya
collection PubMed
description BACKGROUND: Stomach adenocarcinoma (STAD) is a common malignancy worldwide with poor prognosis. Therefore, it is important to identify a valuable prognostic biomarker for STAD. The aim of present study was to identify novel prognostic biomarkers for STAD and evaluate the potential role of hub genes in STAD. METHODS: Gene Expression Profiling Interactive Analysis (GEPIA) and Cancer RNA-Seq Nexus were performed to identify differentially expressed genes (DEGs). Subsequently, hub genes were selected by a Venn diagram, and the expression of key genes was confirmed by UALCAN database. Furthermore, survival analysis of these hub genes was performed using Oncolnc and Human Protein Atlas (HPA) database. Gene alteration status of hub genes was assessed by cBioPortal. Finally, we investigated the association between hub genes and immune cell infiltration in STAD through the Tumor Immune Estimation Resource (TIMER) and GEPIA database. RESULTS: Three common hub genes were obtained, including 2 downregulated DEGs (ABCA8 and FABP4) and one upregulated DEG (SLC52A3). Furthermore, increased expression of ABCA8 and FABP4 and decreased expression of SLC52A3 were correlated with poor prognosis. Meanwhile, three hub genes showed genetic alterations in various datasets of STAD. Finally, our results showed that ABCA8 and FABP4 displayed a positive correlation with immune infiltration, especially in M2 macrophages. CONCLUSIONS: The results of this study suggest that ABCA8 and FABP4 may be used as prognostic biomarkers and correlated with immune infiltration in STAD.
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spelling pubmed-73389802020-07-17 Prognostic Value and Immune Infiltrates of ABCA8 and FABP4 in Stomach Adenocarcinoma Guo, Ya Wang, Zhong Wei Su, Wang Hui Chen, Jing Wang, Ya Li Biomed Res Int Research Article BACKGROUND: Stomach adenocarcinoma (STAD) is a common malignancy worldwide with poor prognosis. Therefore, it is important to identify a valuable prognostic biomarker for STAD. The aim of present study was to identify novel prognostic biomarkers for STAD and evaluate the potential role of hub genes in STAD. METHODS: Gene Expression Profiling Interactive Analysis (GEPIA) and Cancer RNA-Seq Nexus were performed to identify differentially expressed genes (DEGs). Subsequently, hub genes were selected by a Venn diagram, and the expression of key genes was confirmed by UALCAN database. Furthermore, survival analysis of these hub genes was performed using Oncolnc and Human Protein Atlas (HPA) database. Gene alteration status of hub genes was assessed by cBioPortal. Finally, we investigated the association between hub genes and immune cell infiltration in STAD through the Tumor Immune Estimation Resource (TIMER) and GEPIA database. RESULTS: Three common hub genes were obtained, including 2 downregulated DEGs (ABCA8 and FABP4) and one upregulated DEG (SLC52A3). Furthermore, increased expression of ABCA8 and FABP4 and decreased expression of SLC52A3 were correlated with poor prognosis. Meanwhile, three hub genes showed genetic alterations in various datasets of STAD. Finally, our results showed that ABCA8 and FABP4 displayed a positive correlation with immune infiltration, especially in M2 macrophages. CONCLUSIONS: The results of this study suggest that ABCA8 and FABP4 may be used as prognostic biomarkers and correlated with immune infiltration in STAD. Hindawi 2020-06-27 /pmc/articles/PMC7338980/ /pubmed/32685482 http://dx.doi.org/10.1155/2020/4145164 Text en Copyright © 2020 Ya Guo et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Guo, Ya
Wang, Zhong Wei
Su, Wang Hui
Chen, Jing
Wang, Ya Li
Prognostic Value and Immune Infiltrates of ABCA8 and FABP4 in Stomach Adenocarcinoma
title Prognostic Value and Immune Infiltrates of ABCA8 and FABP4 in Stomach Adenocarcinoma
title_full Prognostic Value and Immune Infiltrates of ABCA8 and FABP4 in Stomach Adenocarcinoma
title_fullStr Prognostic Value and Immune Infiltrates of ABCA8 and FABP4 in Stomach Adenocarcinoma
title_full_unstemmed Prognostic Value and Immune Infiltrates of ABCA8 and FABP4 in Stomach Adenocarcinoma
title_short Prognostic Value and Immune Infiltrates of ABCA8 and FABP4 in Stomach Adenocarcinoma
title_sort prognostic value and immune infiltrates of abca8 and fabp4 in stomach adenocarcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7338980/
https://www.ncbi.nlm.nih.gov/pubmed/32685482
http://dx.doi.org/10.1155/2020/4145164
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