Cargando…
A five‐microRNA signature for individualized prognosis evaluation and radiotherapy guidance in patients with diffuse lower‐grade glioma
Despite the prognostic value of IDH and other gene mutations found in diffuse glioma, markers that judge individual prognosis of patients with diffuse lower‐grade glioma (LGG) are still lacking. This study aims to develop an expression‐based microRNA signature to provide survival and radiotherapeuti...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7339211/ https://www.ncbi.nlm.nih.gov/pubmed/32412186 http://dx.doi.org/10.1111/jcmm.15377 |
_version_ | 1783554845075046400 |
---|---|
author | Zhang, Jian‐Hua Hou, Ruiqin Pan, Yuhualei Gao, Yuhan Yang, Ying Tian, Wenqin Zhu, Yan‐Bing |
author_facet | Zhang, Jian‐Hua Hou, Ruiqin Pan, Yuhualei Gao, Yuhan Yang, Ying Tian, Wenqin Zhu, Yan‐Bing |
author_sort | Zhang, Jian‐Hua |
collection | PubMed |
description | Despite the prognostic value of IDH and other gene mutations found in diffuse glioma, markers that judge individual prognosis of patients with diffuse lower‐grade glioma (LGG) are still lacking. This study aims to develop an expression‐based microRNA signature to provide survival and radiotherapeutic response prediction for LGG patients. MicroRNA expression profiles and relevant clinical information of LGG patients were downloaded from The Cancer Genome Atlas (TCGA; the training group) and the Chinese Glioma Genome Atlas (CGGA; the test group). Cox regression analysis, random survival forests‐variable hunting (RSFVH) screening and receiver operating characteristic (ROC) were used to identify the prognostic microRNA signature. ROC and TimeROC curves were plotted to compare the predictive ability of IDH mutation and the signature. Stratification analysis was conducted in patients with radiotherapy information. Gene ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were performed to explore the biological function of the signature. We identified a five‐microRNA signature that can classify patients into low‐risk or high‐risk group with significantly different survival in the training and test datasets (P < 0.001). The five‐microRNA signature was proved to be superior to IDH mutation in survival prediction (AUCtraining = 0.688 vs 0.607). Stratification analysis found the signature could further divide patients after radiotherapy into two risk groups. GO and KEGG analyses revealed that microRNAs from the prognostic signature were mainly enriched in cancer‐associated pathways. The newly discovered five‐microRNA signature could predict survival and radiotherapeutic response of LGG patients based on individual microRNA expression. |
format | Online Article Text |
id | pubmed-7339211 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-73392112020-07-13 A five‐microRNA signature for individualized prognosis evaluation and radiotherapy guidance in patients with diffuse lower‐grade glioma Zhang, Jian‐Hua Hou, Ruiqin Pan, Yuhualei Gao, Yuhan Yang, Ying Tian, Wenqin Zhu, Yan‐Bing J Cell Mol Med Original Articles Despite the prognostic value of IDH and other gene mutations found in diffuse glioma, markers that judge individual prognosis of patients with diffuse lower‐grade glioma (LGG) are still lacking. This study aims to develop an expression‐based microRNA signature to provide survival and radiotherapeutic response prediction for LGG patients. MicroRNA expression profiles and relevant clinical information of LGG patients were downloaded from The Cancer Genome Atlas (TCGA; the training group) and the Chinese Glioma Genome Atlas (CGGA; the test group). Cox regression analysis, random survival forests‐variable hunting (RSFVH) screening and receiver operating characteristic (ROC) were used to identify the prognostic microRNA signature. ROC and TimeROC curves were plotted to compare the predictive ability of IDH mutation and the signature. Stratification analysis was conducted in patients with radiotherapy information. Gene ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were performed to explore the biological function of the signature. We identified a five‐microRNA signature that can classify patients into low‐risk or high‐risk group with significantly different survival in the training and test datasets (P < 0.001). The five‐microRNA signature was proved to be superior to IDH mutation in survival prediction (AUCtraining = 0.688 vs 0.607). Stratification analysis found the signature could further divide patients after radiotherapy into two risk groups. GO and KEGG analyses revealed that microRNAs from the prognostic signature were mainly enriched in cancer‐associated pathways. The newly discovered five‐microRNA signature could predict survival and radiotherapeutic response of LGG patients based on individual microRNA expression. John Wiley and Sons Inc. 2020-05-15 2020-07 /pmc/articles/PMC7339211/ /pubmed/32412186 http://dx.doi.org/10.1111/jcmm.15377 Text en © 2020 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Zhang, Jian‐Hua Hou, Ruiqin Pan, Yuhualei Gao, Yuhan Yang, Ying Tian, Wenqin Zhu, Yan‐Bing A five‐microRNA signature for individualized prognosis evaluation and radiotherapy guidance in patients with diffuse lower‐grade glioma |
title | A five‐microRNA signature for individualized prognosis evaluation and radiotherapy guidance in patients with diffuse lower‐grade glioma |
title_full | A five‐microRNA signature for individualized prognosis evaluation and radiotherapy guidance in patients with diffuse lower‐grade glioma |
title_fullStr | A five‐microRNA signature for individualized prognosis evaluation and radiotherapy guidance in patients with diffuse lower‐grade glioma |
title_full_unstemmed | A five‐microRNA signature for individualized prognosis evaluation and radiotherapy guidance in patients with diffuse lower‐grade glioma |
title_short | A five‐microRNA signature for individualized prognosis evaluation and radiotherapy guidance in patients with diffuse lower‐grade glioma |
title_sort | five‐microrna signature for individualized prognosis evaluation and radiotherapy guidance in patients with diffuse lower‐grade glioma |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7339211/ https://www.ncbi.nlm.nih.gov/pubmed/32412186 http://dx.doi.org/10.1111/jcmm.15377 |
work_keys_str_mv | AT zhangjianhua afivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT houruiqin afivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT panyuhualei afivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT gaoyuhan afivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT yangying afivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT tianwenqin afivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT zhuyanbing afivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT zhangjianhua fivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT houruiqin fivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT panyuhualei fivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT gaoyuhan fivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT yangying fivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT tianwenqin fivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma AT zhuyanbing fivemicrornasignatureforindividualizedprognosisevaluationandradiotherapyguidanceinpatientswithdiffuselowergradeglioma |