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Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations

BACKGROUND: SERF(+) is a high prevalence antigen in the Cromer blood group system that is encoded by a CROM*01.12 allele. The SERF(-) on red cells is caused by a single nucleotide variation, c.647C>T, in exon 5 of the Decay-accelerating factor, DAF gene. Alloanti-SERF was found in a pregnant Thai...

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Autores principales: Nathalang, Oytip, Intharanut, Kamphon, Leetrakool, Nipapan, Mitundee, Supattra, Kupatawintu, Pawinee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society of Hematology; Korean Society of Blood and Marrow Transplantation; Korean Society of Pediatric Hematology-Oncology; Korean Society on Thrombosis and Hemostasis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7343545/
https://www.ncbi.nlm.nih.gov/pubmed/32408415
http://dx.doi.org/10.5045/br.2020.2020042
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author Nathalang, Oytip
Intharanut, Kamphon
Leetrakool, Nipapan
Mitundee, Supattra
Kupatawintu, Pawinee
author_facet Nathalang, Oytip
Intharanut, Kamphon
Leetrakool, Nipapan
Mitundee, Supattra
Kupatawintu, Pawinee
author_sort Nathalang, Oytip
collection PubMed
description BACKGROUND: SERF(+) is a high prevalence antigen in the Cromer blood group system that is encoded by a CROM*01.12 allele. The SERF(-) on red cells is caused by a single nucleotide variation, c.647C>T, in exon 5 of the Decay-accelerating factor, DAF gene. Alloanti-SERF was found in a pregnant Thai woman, and a SERF(-) individual was found among Thai blood donors. Since anti-SERF is commercially unavailable, this study aimed to develop appropriate genotyping methods for CROM*01.12 and CROM*01.-12 alleles and predict the SERF(-) phenotype in Thai blood donors. METHODS: DNA samples obtained from 1,580 central, 300 northern, and 427 southern Thai blood donors were genotyped for CROM*01.12 and CROM*01.-12 allele detection using in-house PCR with sequence-specific primer (PCR-SSP) confirmed by DNA sequencing. RESULTS: Validity of the PCR-SSP genotyping results agreed with DNA sequencing; CROM*01.12/CROM*01.12 was the most common (98.42%, 98.00%, and 98.59%), followed by CROM*01.12/CROM*01.-12 (1.58%, 2.00%, and 1.41%) among central, northern, and southern Thais, respectively. CROM*01.-12/CROM*01.-12 was not detected in all three populations. The alleles found in central Thais did not significantly differ from those found in northern and southern Thais. CONCLUSION: This study is the first to distinguish the predicted SERF phenotypes from genotyping results obtained using in-house PCR-SSP, confirming that the CROM*01.-12 allele frequency ranged from 0.007 to 0.010 in three Thai populations. This helps identify the SERF(-) phenotype among donors and patients, ultimately preventing adverse transfusion reactions.
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spelling pubmed-73435452020-07-27 Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations Nathalang, Oytip Intharanut, Kamphon Leetrakool, Nipapan Mitundee, Supattra Kupatawintu, Pawinee Blood Res Original Article BACKGROUND: SERF(+) is a high prevalence antigen in the Cromer blood group system that is encoded by a CROM*01.12 allele. The SERF(-) on red cells is caused by a single nucleotide variation, c.647C>T, in exon 5 of the Decay-accelerating factor, DAF gene. Alloanti-SERF was found in a pregnant Thai woman, and a SERF(-) individual was found among Thai blood donors. Since anti-SERF is commercially unavailable, this study aimed to develop appropriate genotyping methods for CROM*01.12 and CROM*01.-12 alleles and predict the SERF(-) phenotype in Thai blood donors. METHODS: DNA samples obtained from 1,580 central, 300 northern, and 427 southern Thai blood donors were genotyped for CROM*01.12 and CROM*01.-12 allele detection using in-house PCR with sequence-specific primer (PCR-SSP) confirmed by DNA sequencing. RESULTS: Validity of the PCR-SSP genotyping results agreed with DNA sequencing; CROM*01.12/CROM*01.12 was the most common (98.42%, 98.00%, and 98.59%), followed by CROM*01.12/CROM*01.-12 (1.58%, 2.00%, and 1.41%) among central, northern, and southern Thais, respectively. CROM*01.-12/CROM*01.-12 was not detected in all three populations. The alleles found in central Thais did not significantly differ from those found in northern and southern Thais. CONCLUSION: This study is the first to distinguish the predicted SERF phenotypes from genotyping results obtained using in-house PCR-SSP, confirming that the CROM*01.-12 allele frequency ranged from 0.007 to 0.010 in three Thai populations. This helps identify the SERF(-) phenotype among donors and patients, ultimately preventing adverse transfusion reactions. Korean Society of Hematology; Korean Society of Blood and Marrow Transplantation; Korean Society of Pediatric Hematology-Oncology; Korean Society on Thrombosis and Hemostasis 2020-06-30 2020-06-30 /pmc/articles/PMC7343545/ /pubmed/32408415 http://dx.doi.org/10.5045/br.2020.2020042 Text en © 2020 Korean Society of Hematology This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Nathalang, Oytip
Intharanut, Kamphon
Leetrakool, Nipapan
Mitundee, Supattra
Kupatawintu, Pawinee
Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations
title Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations
title_full Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations
title_fullStr Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations
title_full_unstemmed Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations
title_short Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations
title_sort impact of using genotyping to predict serf negative phenotype in thai blood donor populations
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7343545/
https://www.ncbi.nlm.nih.gov/pubmed/32408415
http://dx.doi.org/10.5045/br.2020.2020042
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