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Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations
BACKGROUND: SERF(+) is a high prevalence antigen in the Cromer blood group system that is encoded by a CROM*01.12 allele. The SERF(-) on red cells is caused by a single nucleotide variation, c.647C>T, in exon 5 of the Decay-accelerating factor, DAF gene. Alloanti-SERF was found in a pregnant Thai...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Society of Hematology; Korean Society of Blood and Marrow Transplantation; Korean Society of Pediatric Hematology-Oncology; Korean Society on Thrombosis and Hemostasis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7343545/ https://www.ncbi.nlm.nih.gov/pubmed/32408415 http://dx.doi.org/10.5045/br.2020.2020042 |
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author | Nathalang, Oytip Intharanut, Kamphon Leetrakool, Nipapan Mitundee, Supattra Kupatawintu, Pawinee |
author_facet | Nathalang, Oytip Intharanut, Kamphon Leetrakool, Nipapan Mitundee, Supattra Kupatawintu, Pawinee |
author_sort | Nathalang, Oytip |
collection | PubMed |
description | BACKGROUND: SERF(+) is a high prevalence antigen in the Cromer blood group system that is encoded by a CROM*01.12 allele. The SERF(-) on red cells is caused by a single nucleotide variation, c.647C>T, in exon 5 of the Decay-accelerating factor, DAF gene. Alloanti-SERF was found in a pregnant Thai woman, and a SERF(-) individual was found among Thai blood donors. Since anti-SERF is commercially unavailable, this study aimed to develop appropriate genotyping methods for CROM*01.12 and CROM*01.-12 alleles and predict the SERF(-) phenotype in Thai blood donors. METHODS: DNA samples obtained from 1,580 central, 300 northern, and 427 southern Thai blood donors were genotyped for CROM*01.12 and CROM*01.-12 allele detection using in-house PCR with sequence-specific primer (PCR-SSP) confirmed by DNA sequencing. RESULTS: Validity of the PCR-SSP genotyping results agreed with DNA sequencing; CROM*01.12/CROM*01.12 was the most common (98.42%, 98.00%, and 98.59%), followed by CROM*01.12/CROM*01.-12 (1.58%, 2.00%, and 1.41%) among central, northern, and southern Thais, respectively. CROM*01.-12/CROM*01.-12 was not detected in all three populations. The alleles found in central Thais did not significantly differ from those found in northern and southern Thais. CONCLUSION: This study is the first to distinguish the predicted SERF phenotypes from genotyping results obtained using in-house PCR-SSP, confirming that the CROM*01.-12 allele frequency ranged from 0.007 to 0.010 in three Thai populations. This helps identify the SERF(-) phenotype among donors and patients, ultimately preventing adverse transfusion reactions. |
format | Online Article Text |
id | pubmed-7343545 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Korean Society of Hematology; Korean Society of Blood and Marrow Transplantation; Korean Society of Pediatric Hematology-Oncology; Korean Society on Thrombosis and Hemostasis |
record_format | MEDLINE/PubMed |
spelling | pubmed-73435452020-07-27 Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations Nathalang, Oytip Intharanut, Kamphon Leetrakool, Nipapan Mitundee, Supattra Kupatawintu, Pawinee Blood Res Original Article BACKGROUND: SERF(+) is a high prevalence antigen in the Cromer blood group system that is encoded by a CROM*01.12 allele. The SERF(-) on red cells is caused by a single nucleotide variation, c.647C>T, in exon 5 of the Decay-accelerating factor, DAF gene. Alloanti-SERF was found in a pregnant Thai woman, and a SERF(-) individual was found among Thai blood donors. Since anti-SERF is commercially unavailable, this study aimed to develop appropriate genotyping methods for CROM*01.12 and CROM*01.-12 alleles and predict the SERF(-) phenotype in Thai blood donors. METHODS: DNA samples obtained from 1,580 central, 300 northern, and 427 southern Thai blood donors were genotyped for CROM*01.12 and CROM*01.-12 allele detection using in-house PCR with sequence-specific primer (PCR-SSP) confirmed by DNA sequencing. RESULTS: Validity of the PCR-SSP genotyping results agreed with DNA sequencing; CROM*01.12/CROM*01.12 was the most common (98.42%, 98.00%, and 98.59%), followed by CROM*01.12/CROM*01.-12 (1.58%, 2.00%, and 1.41%) among central, northern, and southern Thais, respectively. CROM*01.-12/CROM*01.-12 was not detected in all three populations. The alleles found in central Thais did not significantly differ from those found in northern and southern Thais. CONCLUSION: This study is the first to distinguish the predicted SERF phenotypes from genotyping results obtained using in-house PCR-SSP, confirming that the CROM*01.-12 allele frequency ranged from 0.007 to 0.010 in three Thai populations. This helps identify the SERF(-) phenotype among donors and patients, ultimately preventing adverse transfusion reactions. Korean Society of Hematology; Korean Society of Blood and Marrow Transplantation; Korean Society of Pediatric Hematology-Oncology; Korean Society on Thrombosis and Hemostasis 2020-06-30 2020-06-30 /pmc/articles/PMC7343545/ /pubmed/32408415 http://dx.doi.org/10.5045/br.2020.2020042 Text en © 2020 Korean Society of Hematology This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Nathalang, Oytip Intharanut, Kamphon Leetrakool, Nipapan Mitundee, Supattra Kupatawintu, Pawinee Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations |
title | Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations |
title_full | Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations |
title_fullStr | Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations |
title_full_unstemmed | Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations |
title_short | Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations |
title_sort | impact of using genotyping to predict serf negative phenotype in thai blood donor populations |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7343545/ https://www.ncbi.nlm.nih.gov/pubmed/32408415 http://dx.doi.org/10.5045/br.2020.2020042 |
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