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On a Coupled Time-Dependent SIR Models Fitting with New York and New-Jersey States COVID-19 Data

This article describes a simple Susceptible Infected Recovered (SIR) model fitting with COVID-19 data for the month of March 2020 in New York (NY) state. The model is a classical SIR, but is non-autonomous; the rate of susceptible people becoming infected is adjusted over time in order to fit the av...

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Detalles Bibliográficos
Autores principales: Ambrosio, Benjamin, Aziz-Alaoui, M. A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7344619/
https://www.ncbi.nlm.nih.gov/pubmed/32599867
http://dx.doi.org/10.3390/biology9060135
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author Ambrosio, Benjamin
Aziz-Alaoui, M. A.
author_facet Ambrosio, Benjamin
Aziz-Alaoui, M. A.
author_sort Ambrosio, Benjamin
collection PubMed
description This article describes a simple Susceptible Infected Recovered (SIR) model fitting with COVID-19 data for the month of March 2020 in New York (NY) state. The model is a classical SIR, but is non-autonomous; the rate of susceptible people becoming infected is adjusted over time in order to fit the available data. The death rate is also secondarily adjusted. Our fitting is made under the assumption that due to limiting number of tests, a large part of the infected population has not been tested positive. In the last part, we extend the model to take into account the daily fluxes between New Jersey (NJ) and NY states and fit the data for both states. Our simple model fits the available data, and illustrates typical dynamics of the disease: exponential increase, apex and decrease. The model highlights a decrease in the transmission rate over the period which gives a quantitative illustration about how lockdown policies reduce the spread of the pandemic. The coupled model with NY and NJ states shows a wave in NJ following the NY wave, illustrating the mechanism of spread from one attractive hot spot to its neighbor.
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spelling pubmed-73446192020-07-09 On a Coupled Time-Dependent SIR Models Fitting with New York and New-Jersey States COVID-19 Data Ambrosio, Benjamin Aziz-Alaoui, M. A. Biology (Basel) Article This article describes a simple Susceptible Infected Recovered (SIR) model fitting with COVID-19 data for the month of March 2020 in New York (NY) state. The model is a classical SIR, but is non-autonomous; the rate of susceptible people becoming infected is adjusted over time in order to fit the available data. The death rate is also secondarily adjusted. Our fitting is made under the assumption that due to limiting number of tests, a large part of the infected population has not been tested positive. In the last part, we extend the model to take into account the daily fluxes between New Jersey (NJ) and NY states and fit the data for both states. Our simple model fits the available data, and illustrates typical dynamics of the disease: exponential increase, apex and decrease. The model highlights a decrease in the transmission rate over the period which gives a quantitative illustration about how lockdown policies reduce the spread of the pandemic. The coupled model with NY and NJ states shows a wave in NJ following the NY wave, illustrating the mechanism of spread from one attractive hot spot to its neighbor. MDPI 2020-06-24 /pmc/articles/PMC7344619/ /pubmed/32599867 http://dx.doi.org/10.3390/biology9060135 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ambrosio, Benjamin
Aziz-Alaoui, M. A.
On a Coupled Time-Dependent SIR Models Fitting with New York and New-Jersey States COVID-19 Data
title On a Coupled Time-Dependent SIR Models Fitting with New York and New-Jersey States COVID-19 Data
title_full On a Coupled Time-Dependent SIR Models Fitting with New York and New-Jersey States COVID-19 Data
title_fullStr On a Coupled Time-Dependent SIR Models Fitting with New York and New-Jersey States COVID-19 Data
title_full_unstemmed On a Coupled Time-Dependent SIR Models Fitting with New York and New-Jersey States COVID-19 Data
title_short On a Coupled Time-Dependent SIR Models Fitting with New York and New-Jersey States COVID-19 Data
title_sort on a coupled time-dependent sir models fitting with new york and new-jersey states covid-19 data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7344619/
https://www.ncbi.nlm.nih.gov/pubmed/32599867
http://dx.doi.org/10.3390/biology9060135
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