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Age-Dependent Metabolic Profiles Unravel the Metabolic Relationships within and between Flax Leaves (Linum usitatissimum)
Flax for oil seed is a crop of increasing popularity, but its cultivation needs technical improvement. Important agronomic traits such as productivity and resistance to stresses are to be regarded as the result of the combined responses of individual organs and their inter-communication. Ultimately,...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7345097/ https://www.ncbi.nlm.nih.gov/pubmed/32466546 http://dx.doi.org/10.3390/metabo10060218 |
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author | Pontarin, Nicole Molinié, Roland Mathiron, David Tchoumtchoua, Job Bassard, Solène Gagneul, David Thiombiano, Benjamin Demailly, Hervé Fontaine, Jean-Xavier Guillot, Xavier Sarazin, Vivien Quéro, Anthony Mesnard, François |
author_facet | Pontarin, Nicole Molinié, Roland Mathiron, David Tchoumtchoua, Job Bassard, Solène Gagneul, David Thiombiano, Benjamin Demailly, Hervé Fontaine, Jean-Xavier Guillot, Xavier Sarazin, Vivien Quéro, Anthony Mesnard, François |
author_sort | Pontarin, Nicole |
collection | PubMed |
description | Flax for oil seed is a crop of increasing popularity, but its cultivation needs technical improvement. Important agronomic traits such as productivity and resistance to stresses are to be regarded as the result of the combined responses of individual organs and their inter-communication. Ultimately, these responses directly reflect the metabolic profile at the cellular level. Above ground, the complexity of the plant phenotype is governed by leaves at different developmental stages, and their ability to synthesise and exchange metabolites. In this study, the metabolic profile of differently-developed leaves was used firstly to discriminate flax leaf developmental stages, and secondly to analyse the allocation of the metabolites within and between leaves. For this purpose, the concentration of 52 metabolites, both primary and specialized, was followed by gas chromatography (GC-) and liquid chromatography coupled to mass spectrometry (LC-MS) in alternate pairs of flax leaves. On the basis of their metabolic content, three populations of leaves in different growth stages could be distinguished. Primary and specialized metabolites showed characteristic distribution patterns, and compounds similarly evolving with leaf age could be grouped by the aid of the Kohonen self-organising map (SOM) algorithm. Ultimately, visualisation of the correlations between metabolites via hierarchical cluster analysis (HCA) allowed the assessment of the metabolic fluxes characterising different leaf developmental stages, and the investigation of the relationships between primary and specialized metabolites. |
format | Online Article Text |
id | pubmed-7345097 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-73450972020-07-09 Age-Dependent Metabolic Profiles Unravel the Metabolic Relationships within and between Flax Leaves (Linum usitatissimum) Pontarin, Nicole Molinié, Roland Mathiron, David Tchoumtchoua, Job Bassard, Solène Gagneul, David Thiombiano, Benjamin Demailly, Hervé Fontaine, Jean-Xavier Guillot, Xavier Sarazin, Vivien Quéro, Anthony Mesnard, François Metabolites Article Flax for oil seed is a crop of increasing popularity, but its cultivation needs technical improvement. Important agronomic traits such as productivity and resistance to stresses are to be regarded as the result of the combined responses of individual organs and their inter-communication. Ultimately, these responses directly reflect the metabolic profile at the cellular level. Above ground, the complexity of the plant phenotype is governed by leaves at different developmental stages, and their ability to synthesise and exchange metabolites. In this study, the metabolic profile of differently-developed leaves was used firstly to discriminate flax leaf developmental stages, and secondly to analyse the allocation of the metabolites within and between leaves. For this purpose, the concentration of 52 metabolites, both primary and specialized, was followed by gas chromatography (GC-) and liquid chromatography coupled to mass spectrometry (LC-MS) in alternate pairs of flax leaves. On the basis of their metabolic content, three populations of leaves in different growth stages could be distinguished. Primary and specialized metabolites showed characteristic distribution patterns, and compounds similarly evolving with leaf age could be grouped by the aid of the Kohonen self-organising map (SOM) algorithm. Ultimately, visualisation of the correlations between metabolites via hierarchical cluster analysis (HCA) allowed the assessment of the metabolic fluxes characterising different leaf developmental stages, and the investigation of the relationships between primary and specialized metabolites. MDPI 2020-05-26 /pmc/articles/PMC7345097/ /pubmed/32466546 http://dx.doi.org/10.3390/metabo10060218 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Pontarin, Nicole Molinié, Roland Mathiron, David Tchoumtchoua, Job Bassard, Solène Gagneul, David Thiombiano, Benjamin Demailly, Hervé Fontaine, Jean-Xavier Guillot, Xavier Sarazin, Vivien Quéro, Anthony Mesnard, François Age-Dependent Metabolic Profiles Unravel the Metabolic Relationships within and between Flax Leaves (Linum usitatissimum) |
title | Age-Dependent Metabolic Profiles Unravel the Metabolic Relationships within and between Flax Leaves (Linum usitatissimum) |
title_full | Age-Dependent Metabolic Profiles Unravel the Metabolic Relationships within and between Flax Leaves (Linum usitatissimum) |
title_fullStr | Age-Dependent Metabolic Profiles Unravel the Metabolic Relationships within and between Flax Leaves (Linum usitatissimum) |
title_full_unstemmed | Age-Dependent Metabolic Profiles Unravel the Metabolic Relationships within and between Flax Leaves (Linum usitatissimum) |
title_short | Age-Dependent Metabolic Profiles Unravel the Metabolic Relationships within and between Flax Leaves (Linum usitatissimum) |
title_sort | age-dependent metabolic profiles unravel the metabolic relationships within and between flax leaves (linum usitatissimum) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7345097/ https://www.ncbi.nlm.nih.gov/pubmed/32466546 http://dx.doi.org/10.3390/metabo10060218 |
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