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Systematic Identification of lncRNA-Associated ceRNA Networks in Immune Thrombocytopenia

Primary immune thrombocytopenia (ITP) is an autoimmune disease. However, the molecular mechanisms underlying ITP remained to be further investigated. In the present study, we analyzed a series of public datasets (including GSE43177 and GSE43178) and identified 468 upregulated mRNAs, 272 downregulate...

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Autores principales: Fan, Zhenwei, Wang, Xuan, Li, Peng, Mei, Chunli, Zhang, Min, Zhao, Chunshan, Song, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7345964/
https://www.ncbi.nlm.nih.gov/pubmed/32670393
http://dx.doi.org/10.1155/2020/6193593
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author Fan, Zhenwei
Wang, Xuan
Li, Peng
Mei, Chunli
Zhang, Min
Zhao, Chunshan
Song, Yan
author_facet Fan, Zhenwei
Wang, Xuan
Li, Peng
Mei, Chunli
Zhang, Min
Zhao, Chunshan
Song, Yan
author_sort Fan, Zhenwei
collection PubMed
description Primary immune thrombocytopenia (ITP) is an autoimmune disease. However, the molecular mechanisms underlying ITP remained to be further investigated. In the present study, we analyzed a series of public datasets (including GSE43177 and GSE43178) and identified 468 upregulated mRNAs, 272 downregulated mRNAs, 134 upregulated lncRNAs, 23 downregulated lncRNAs, 29 upregulated miRNAs, and 39 downregulated miRNAs in ITP patients. Then, we constructed protein-protein interaction networks, miRNA-mRNA and lncRNA coexpression networks in ITP. Bioinformatics analysis showed these genes regulated multiple biological processes in ITP, such as mRNA nonsense-mediated decay, translation, cell-cell adhesion, proteasome-mediated ubiquitin, and mRNA splicing. We thought the present study could broaden our insights into the mechanism underlying the progression of ITP and provide a potential biomarker for the prognosis of ITP.
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spelling pubmed-73459642020-07-14 Systematic Identification of lncRNA-Associated ceRNA Networks in Immune Thrombocytopenia Fan, Zhenwei Wang, Xuan Li, Peng Mei, Chunli Zhang, Min Zhao, Chunshan Song, Yan Comput Math Methods Med Research Article Primary immune thrombocytopenia (ITP) is an autoimmune disease. However, the molecular mechanisms underlying ITP remained to be further investigated. In the present study, we analyzed a series of public datasets (including GSE43177 and GSE43178) and identified 468 upregulated mRNAs, 272 downregulated mRNAs, 134 upregulated lncRNAs, 23 downregulated lncRNAs, 29 upregulated miRNAs, and 39 downregulated miRNAs in ITP patients. Then, we constructed protein-protein interaction networks, miRNA-mRNA and lncRNA coexpression networks in ITP. Bioinformatics analysis showed these genes regulated multiple biological processes in ITP, such as mRNA nonsense-mediated decay, translation, cell-cell adhesion, proteasome-mediated ubiquitin, and mRNA splicing. We thought the present study could broaden our insights into the mechanism underlying the progression of ITP and provide a potential biomarker for the prognosis of ITP. Hindawi 2020-06-30 /pmc/articles/PMC7345964/ /pubmed/32670393 http://dx.doi.org/10.1155/2020/6193593 Text en Copyright © 2020 Zhenwei Fan et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Fan, Zhenwei
Wang, Xuan
Li, Peng
Mei, Chunli
Zhang, Min
Zhao, Chunshan
Song, Yan
Systematic Identification of lncRNA-Associated ceRNA Networks in Immune Thrombocytopenia
title Systematic Identification of lncRNA-Associated ceRNA Networks in Immune Thrombocytopenia
title_full Systematic Identification of lncRNA-Associated ceRNA Networks in Immune Thrombocytopenia
title_fullStr Systematic Identification of lncRNA-Associated ceRNA Networks in Immune Thrombocytopenia
title_full_unstemmed Systematic Identification of lncRNA-Associated ceRNA Networks in Immune Thrombocytopenia
title_short Systematic Identification of lncRNA-Associated ceRNA Networks in Immune Thrombocytopenia
title_sort systematic identification of lncrna-associated cerna networks in immune thrombocytopenia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7345964/
https://www.ncbi.nlm.nih.gov/pubmed/32670393
http://dx.doi.org/10.1155/2020/6193593
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