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Plus Disease in Retinopathy of Prematurity: Convolutional Neural Network Performance Using a Combined Neural Network and Feature Extraction Approach

PURPOSE: Retinopathy of prematurity (ROP), a leading cause of childhood blindness, is diagnosed by clinical ophthalmoscopic examinations or reading retinal images. Plus disease, defined as abnormal tortuosity and dilation of the posterior retinal blood vessels, is the most important feature to deter...

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Autores principales: Yildiz, Veysi M., Tian, Peng, Yildiz, Ilkay, Brown, James M., Kalpathy-Cramer, Jayashree, Dy, Jennifer, Ioannidis, Stratis, Erdogmus, Deniz, Ostmo, Susan, Kim, Sang Jin, Chan, R. V. Paul, Campbell, J. Peter, Chiang, Michael F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7346878/
https://www.ncbi.nlm.nih.gov/pubmed/32704416
http://dx.doi.org/10.1167/tvst.9.2.10
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author Yildiz, Veysi M.
Tian, Peng
Yildiz, Ilkay
Brown, James M.
Kalpathy-Cramer, Jayashree
Dy, Jennifer
Ioannidis, Stratis
Erdogmus, Deniz
Ostmo, Susan
Kim, Sang Jin
Chan, R. V. Paul
Campbell, J. Peter
Chiang, Michael F.
author_facet Yildiz, Veysi M.
Tian, Peng
Yildiz, Ilkay
Brown, James M.
Kalpathy-Cramer, Jayashree
Dy, Jennifer
Ioannidis, Stratis
Erdogmus, Deniz
Ostmo, Susan
Kim, Sang Jin
Chan, R. V. Paul
Campbell, J. Peter
Chiang, Michael F.
author_sort Yildiz, Veysi M.
collection PubMed
description PURPOSE: Retinopathy of prematurity (ROP), a leading cause of childhood blindness, is diagnosed by clinical ophthalmoscopic examinations or reading retinal images. Plus disease, defined as abnormal tortuosity and dilation of the posterior retinal blood vessels, is the most important feature to determine treatment-requiring ROP. We aimed to create a complete, publicly available and feature-extraction-based pipeline, I-ROP ASSIST, that achieves convolutional neural network (CNN)-like performance when diagnosing plus disease from retinal images. METHODS: We developed two datasets containing 100 and 5512 posterior retinal images, respectively. After segmenting retinal vessels, we detected the vessel centerlines. Then, we extracted features relevant to ROP, including tortuosity and dilation measures, and used these features in the classifiers including logistic regression, support vector machine and neural networks to assess a severity score for the input. We tested our system with fivefold cross-validation and calculated the area under the curve (AUC) metric for each classifier and dataset. RESULTS: For predicting plus versus not-plus categories, we achieved 99% and 94% AUC on the first and second datasets, respectively. For predicting pre-plus or worse versus normal categories, we achieved 99% and 88% AUC on the first and second datasets, respectively. The CNN method achieved 98% and 94% for predicting two categories on the second dataset. CONCLUSIONS: Our system combining automatic retinal vessel segmentation, tracing, feature extraction and classification is able to diagnose plus disease in ROP with CNN-like performance. TRANSLATIONAL RELEVANCE: The high performance of I-ROP ASSIST suggests potential applications in automated and objective diagnosis of plus disease.
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spelling pubmed-73468782020-07-22 Plus Disease in Retinopathy of Prematurity: Convolutional Neural Network Performance Using a Combined Neural Network and Feature Extraction Approach Yildiz, Veysi M. Tian, Peng Yildiz, Ilkay Brown, James M. Kalpathy-Cramer, Jayashree Dy, Jennifer Ioannidis, Stratis Erdogmus, Deniz Ostmo, Susan Kim, Sang Jin Chan, R. V. Paul Campbell, J. Peter Chiang, Michael F. Transl Vis Sci Technol Special Issue PURPOSE: Retinopathy of prematurity (ROP), a leading cause of childhood blindness, is diagnosed by clinical ophthalmoscopic examinations or reading retinal images. Plus disease, defined as abnormal tortuosity and dilation of the posterior retinal blood vessels, is the most important feature to determine treatment-requiring ROP. We aimed to create a complete, publicly available and feature-extraction-based pipeline, I-ROP ASSIST, that achieves convolutional neural network (CNN)-like performance when diagnosing plus disease from retinal images. METHODS: We developed two datasets containing 100 and 5512 posterior retinal images, respectively. After segmenting retinal vessels, we detected the vessel centerlines. Then, we extracted features relevant to ROP, including tortuosity and dilation measures, and used these features in the classifiers including logistic regression, support vector machine and neural networks to assess a severity score for the input. We tested our system with fivefold cross-validation and calculated the area under the curve (AUC) metric for each classifier and dataset. RESULTS: For predicting plus versus not-plus categories, we achieved 99% and 94% AUC on the first and second datasets, respectively. For predicting pre-plus or worse versus normal categories, we achieved 99% and 88% AUC on the first and second datasets, respectively. The CNN method achieved 98% and 94% for predicting two categories on the second dataset. CONCLUSIONS: Our system combining automatic retinal vessel segmentation, tracing, feature extraction and classification is able to diagnose plus disease in ROP with CNN-like performance. TRANSLATIONAL RELEVANCE: The high performance of I-ROP ASSIST suggests potential applications in automated and objective diagnosis of plus disease. The Association for Research in Vision and Ophthalmology 2020-02-14 /pmc/articles/PMC7346878/ /pubmed/32704416 http://dx.doi.org/10.1167/tvst.9.2.10 Text en Copyright 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
spellingShingle Special Issue
Yildiz, Veysi M.
Tian, Peng
Yildiz, Ilkay
Brown, James M.
Kalpathy-Cramer, Jayashree
Dy, Jennifer
Ioannidis, Stratis
Erdogmus, Deniz
Ostmo, Susan
Kim, Sang Jin
Chan, R. V. Paul
Campbell, J. Peter
Chiang, Michael F.
Plus Disease in Retinopathy of Prematurity: Convolutional Neural Network Performance Using a Combined Neural Network and Feature Extraction Approach
title Plus Disease in Retinopathy of Prematurity: Convolutional Neural Network Performance Using a Combined Neural Network and Feature Extraction Approach
title_full Plus Disease in Retinopathy of Prematurity: Convolutional Neural Network Performance Using a Combined Neural Network and Feature Extraction Approach
title_fullStr Plus Disease in Retinopathy of Prematurity: Convolutional Neural Network Performance Using a Combined Neural Network and Feature Extraction Approach
title_full_unstemmed Plus Disease in Retinopathy of Prematurity: Convolutional Neural Network Performance Using a Combined Neural Network and Feature Extraction Approach
title_short Plus Disease in Retinopathy of Prematurity: Convolutional Neural Network Performance Using a Combined Neural Network and Feature Extraction Approach
title_sort plus disease in retinopathy of prematurity: convolutional neural network performance using a combined neural network and feature extraction approach
topic Special Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7346878/
https://www.ncbi.nlm.nih.gov/pubmed/32704416
http://dx.doi.org/10.1167/tvst.9.2.10
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