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Evaluation of the impact of body mass index on venous thromboembolism risk factors
In this paper, we investigate the interaction impacts of body mass index (BMI) on the other important risk factors for venous thromboembolism (VTE), using deep venous thrombosis (DVT) patient data from the International Warfarin Pharmacogenetics Consortium (IWPC). We apply eight machine learning tec...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7347165/ https://www.ncbi.nlm.nih.gov/pubmed/32645000 http://dx.doi.org/10.1371/journal.pone.0235007 |
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author | Tajik, Fatemeh Wang, Mingzheng Zhang, Xiaohui Han, Jie |
author_facet | Tajik, Fatemeh Wang, Mingzheng Zhang, Xiaohui Han, Jie |
author_sort | Tajik, Fatemeh |
collection | PubMed |
description | In this paper, we investigate the interaction impacts of body mass index (BMI) on the other important risk factors for venous thromboembolism (VTE), using deep venous thrombosis (DVT) patient data from the International Warfarin Pharmacogenetics Consortium (IWPC). We apply eight machine learning techniques, including naive Bayes classifier (NB), support vector machine (SVM), elastic net regression (ENET), logistic regression (LR), lasso regression (LAR), multivariate adaptive regression splines (MARS), boosted regression tree (BRT) and random forest model (RF). The RF method is selected as the best model for classification. Out of 33 features considered in this study, we identify 12 variables as relatively important risk factors for VTE. Finally, we examine the interaction impacts of BMI on these important VTE risk factors. We conclude that the impacts of risk factors on VTE incidence are varying across different BMI groups, and the variations are different for different risk factors. Therefore the interaction impacts of BMI on the other risk factors have to be taken into account in order to better understand the incidence of VTE. |
format | Online Article Text |
id | pubmed-7347165 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-73471652020-07-20 Evaluation of the impact of body mass index on venous thromboembolism risk factors Tajik, Fatemeh Wang, Mingzheng Zhang, Xiaohui Han, Jie PLoS One Research Article In this paper, we investigate the interaction impacts of body mass index (BMI) on the other important risk factors for venous thromboembolism (VTE), using deep venous thrombosis (DVT) patient data from the International Warfarin Pharmacogenetics Consortium (IWPC). We apply eight machine learning techniques, including naive Bayes classifier (NB), support vector machine (SVM), elastic net regression (ENET), logistic regression (LR), lasso regression (LAR), multivariate adaptive regression splines (MARS), boosted regression tree (BRT) and random forest model (RF). The RF method is selected as the best model for classification. Out of 33 features considered in this study, we identify 12 variables as relatively important risk factors for VTE. Finally, we examine the interaction impacts of BMI on these important VTE risk factors. We conclude that the impacts of risk factors on VTE incidence are varying across different BMI groups, and the variations are different for different risk factors. Therefore the interaction impacts of BMI on the other risk factors have to be taken into account in order to better understand the incidence of VTE. Public Library of Science 2020-07-09 /pmc/articles/PMC7347165/ /pubmed/32645000 http://dx.doi.org/10.1371/journal.pone.0235007 Text en © 2020 Tajik et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Tajik, Fatemeh Wang, Mingzheng Zhang, Xiaohui Han, Jie Evaluation of the impact of body mass index on venous thromboembolism risk factors |
title | Evaluation of the impact of body mass index on venous thromboembolism risk factors |
title_full | Evaluation of the impact of body mass index on venous thromboembolism risk factors |
title_fullStr | Evaluation of the impact of body mass index on venous thromboembolism risk factors |
title_full_unstemmed | Evaluation of the impact of body mass index on venous thromboembolism risk factors |
title_short | Evaluation of the impact of body mass index on venous thromboembolism risk factors |
title_sort | evaluation of the impact of body mass index on venous thromboembolism risk factors |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7347165/ https://www.ncbi.nlm.nih.gov/pubmed/32645000 http://dx.doi.org/10.1371/journal.pone.0235007 |
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