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Estimating and interpreting nonlinear receptive field of sensory neural responses with deep neural network models
Our understanding of nonlinear stimulus transformations by neural circuits is hindered by the lack of comprehensive yet interpretable computational modeling frameworks. Here, we propose a data-driven approach based on deep neural networks to directly model arbitrarily nonlinear stimulus-response map...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7347387/ https://www.ncbi.nlm.nih.gov/pubmed/32589140 http://dx.doi.org/10.7554/eLife.53445 |
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author | Keshishian, Menoua Akbari, Hassan Khalighinejad, Bahar Herrero, Jose L Mehta, Ashesh D Mesgarani, Nima |
author_facet | Keshishian, Menoua Akbari, Hassan Khalighinejad, Bahar Herrero, Jose L Mehta, Ashesh D Mesgarani, Nima |
author_sort | Keshishian, Menoua |
collection | PubMed |
description | Our understanding of nonlinear stimulus transformations by neural circuits is hindered by the lack of comprehensive yet interpretable computational modeling frameworks. Here, we propose a data-driven approach based on deep neural networks to directly model arbitrarily nonlinear stimulus-response mappings. Reformulating the exact function of a trained neural network as a collection of stimulus-dependent linear functions enables a locally linear receptive field interpretation of the neural network. Predicting the neural responses recorded invasively from the auditory cortex of neurosurgical patients as they listened to speech, this approach significantly improves the prediction accuracy of auditory cortical responses, particularly in nonprimary areas. Moreover, interpreting the functions learned by neural networks uncovered three distinct types of nonlinear transformations of speech that varied considerably from primary to nonprimary auditory regions. The ability of this framework to capture arbitrary stimulus-response mappings while maintaining model interpretability leads to a better understanding of cortical processing of sensory signals. |
format | Online Article Text |
id | pubmed-7347387 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-73473872020-07-13 Estimating and interpreting nonlinear receptive field of sensory neural responses with deep neural network models Keshishian, Menoua Akbari, Hassan Khalighinejad, Bahar Herrero, Jose L Mehta, Ashesh D Mesgarani, Nima eLife Neuroscience Our understanding of nonlinear stimulus transformations by neural circuits is hindered by the lack of comprehensive yet interpretable computational modeling frameworks. Here, we propose a data-driven approach based on deep neural networks to directly model arbitrarily nonlinear stimulus-response mappings. Reformulating the exact function of a trained neural network as a collection of stimulus-dependent linear functions enables a locally linear receptive field interpretation of the neural network. Predicting the neural responses recorded invasively from the auditory cortex of neurosurgical patients as they listened to speech, this approach significantly improves the prediction accuracy of auditory cortical responses, particularly in nonprimary areas. Moreover, interpreting the functions learned by neural networks uncovered three distinct types of nonlinear transformations of speech that varied considerably from primary to nonprimary auditory regions. The ability of this framework to capture arbitrary stimulus-response mappings while maintaining model interpretability leads to a better understanding of cortical processing of sensory signals. eLife Sciences Publications, Ltd 2020-06-26 /pmc/articles/PMC7347387/ /pubmed/32589140 http://dx.doi.org/10.7554/eLife.53445 Text en © 2020, Keshishian et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Neuroscience Keshishian, Menoua Akbari, Hassan Khalighinejad, Bahar Herrero, Jose L Mehta, Ashesh D Mesgarani, Nima Estimating and interpreting nonlinear receptive field of sensory neural responses with deep neural network models |
title | Estimating and interpreting nonlinear receptive field of sensory neural responses with deep neural network models |
title_full | Estimating and interpreting nonlinear receptive field of sensory neural responses with deep neural network models |
title_fullStr | Estimating and interpreting nonlinear receptive field of sensory neural responses with deep neural network models |
title_full_unstemmed | Estimating and interpreting nonlinear receptive field of sensory neural responses with deep neural network models |
title_short | Estimating and interpreting nonlinear receptive field of sensory neural responses with deep neural network models |
title_sort | estimating and interpreting nonlinear receptive field of sensory neural responses with deep neural network models |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7347387/ https://www.ncbi.nlm.nih.gov/pubmed/32589140 http://dx.doi.org/10.7554/eLife.53445 |
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