Transcriptome Sequencing Reveals the Genome Sequence of Pea Early Browning Virus from a 29-Year-Old Faba Bean Sample

Pea early browning virus (PEBV) is transmitted by soil-inhabiting trichodorid nematodes and via seeds. The transcriptome sequencing method, followed by de novo assembly, revealed the PEBV Libyan isolate LyV66-91 genome. Its RNA1 resembled that of UK isolate SP5 with 93.91% nucleotide identity, and i...

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Autores principales: Maina, S., Zheng, L., King, S., McQueen, V. L., Norton, S. L., Rodoni, B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7348028/
https://www.ncbi.nlm.nih.gov/pubmed/32646910
http://dx.doi.org/10.1128/MRA.00673-20
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author Maina, S.
Zheng, L.
King, S.
McQueen, V. L.
Norton, S. L.
Rodoni, B.
author_facet Maina, S.
Zheng, L.
King, S.
McQueen, V. L.
Norton, S. L.
Rodoni, B.
author_sort Maina, S.
collection PubMed
description Pea early browning virus (PEBV) is transmitted by soil-inhabiting trichodorid nematodes and via seeds. The transcriptome sequencing method, followed by de novo assembly, revealed the PEBV Libyan isolate LyV66-91 genome. Its RNA1 resembled that of UK isolate SP5 with 93.91% nucleotide identity, and its RNA2 had 63.32% nucleotide identity to that of Dutch isolate E116.
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spelling pubmed-73480282020-07-16 Transcriptome Sequencing Reveals the Genome Sequence of Pea Early Browning Virus from a 29-Year-Old Faba Bean Sample Maina, S. Zheng, L. King, S. McQueen, V. L. Norton, S. L. Rodoni, B. Microbiol Resour Announc Genome Sequences Pea early browning virus (PEBV) is transmitted by soil-inhabiting trichodorid nematodes and via seeds. The transcriptome sequencing method, followed by de novo assembly, revealed the PEBV Libyan isolate LyV66-91 genome. Its RNA1 resembled that of UK isolate SP5 with 93.91% nucleotide identity, and its RNA2 had 63.32% nucleotide identity to that of Dutch isolate E116. American Society for Microbiology 2020-07-09 /pmc/articles/PMC7348028/ /pubmed/32646910 http://dx.doi.org/10.1128/MRA.00673-20 Text en © Crown copyright 2020. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Maina, S.
Zheng, L.
King, S.
McQueen, V. L.
Norton, S. L.
Rodoni, B.
Transcriptome Sequencing Reveals the Genome Sequence of Pea Early Browning Virus from a 29-Year-Old Faba Bean Sample
title Transcriptome Sequencing Reveals the Genome Sequence of Pea Early Browning Virus from a 29-Year-Old Faba Bean Sample
title_full Transcriptome Sequencing Reveals the Genome Sequence of Pea Early Browning Virus from a 29-Year-Old Faba Bean Sample
title_fullStr Transcriptome Sequencing Reveals the Genome Sequence of Pea Early Browning Virus from a 29-Year-Old Faba Bean Sample
title_full_unstemmed Transcriptome Sequencing Reveals the Genome Sequence of Pea Early Browning Virus from a 29-Year-Old Faba Bean Sample
title_short Transcriptome Sequencing Reveals the Genome Sequence of Pea Early Browning Virus from a 29-Year-Old Faba Bean Sample
title_sort transcriptome sequencing reveals the genome sequence of pea early browning virus from a 29-year-old faba bean sample
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7348028/
https://www.ncbi.nlm.nih.gov/pubmed/32646910
http://dx.doi.org/10.1128/MRA.00673-20
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