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Genetic Etiology Shared by Multiple Sclerosis and Ischemic Stroke
Although dramatic progress has been achieved in the understanding and treatment of multiple sclerosis (MS) and ischemic stroke (IS), more precise and instructive support is required for further research. Recent large-scale genome-wide association studies (GWASs) have already revealed risk variants f...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7348066/ https://www.ncbi.nlm.nih.gov/pubmed/32719717 http://dx.doi.org/10.3389/fgene.2020.00646 |
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author | Tian, Zhu Song, Yang Yao, Yang Guo, Jie Gong, Zhongying Wang, Zhiyun |
author_facet | Tian, Zhu Song, Yang Yao, Yang Guo, Jie Gong, Zhongying Wang, Zhiyun |
author_sort | Tian, Zhu |
collection | PubMed |
description | Although dramatic progress has been achieved in the understanding and treatment of multiple sclerosis (MS) and ischemic stroke (IS), more precise and instructive support is required for further research. Recent large-scale genome-wide association studies (GWASs) have already revealed risk variants for IS and MS, but the common genetic etiology between MS and IS remains an unresolved issue. This research was designed to overlapping genes between MS and IS and unmask their transcriptional features. We designed a three-section analysis process. Firstly, we computed gene-based analyses of MS GWAS and IS GWAS data sets by VGEAS2. Secondly, overlapping genes of significance were identified in a meta-analysis using the Fisher’s procedure. Finally, we performed gene expression analyses to confirm transcriptional changes. We identified 24 shared genes with Bonferroni correction (P(combined) < 2.31E-04), and five (FOXP1, CAMK2G, CLEC2D, LBH, and SLC2A4RG) had significant expression differences in MS and IS gene expression omnibus data sets. These meaningful shared genes between IS and MS shed light on the underlying genetic etiologies shared by the diseases. Our results provide a basis for in-depth genomic studies of associations between MS and IS. |
format | Online Article Text |
id | pubmed-7348066 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-73480662020-07-26 Genetic Etiology Shared by Multiple Sclerosis and Ischemic Stroke Tian, Zhu Song, Yang Yao, Yang Guo, Jie Gong, Zhongying Wang, Zhiyun Front Genet Genetics Although dramatic progress has been achieved in the understanding and treatment of multiple sclerosis (MS) and ischemic stroke (IS), more precise and instructive support is required for further research. Recent large-scale genome-wide association studies (GWASs) have already revealed risk variants for IS and MS, but the common genetic etiology between MS and IS remains an unresolved issue. This research was designed to overlapping genes between MS and IS and unmask their transcriptional features. We designed a three-section analysis process. Firstly, we computed gene-based analyses of MS GWAS and IS GWAS data sets by VGEAS2. Secondly, overlapping genes of significance were identified in a meta-analysis using the Fisher’s procedure. Finally, we performed gene expression analyses to confirm transcriptional changes. We identified 24 shared genes with Bonferroni correction (P(combined) < 2.31E-04), and five (FOXP1, CAMK2G, CLEC2D, LBH, and SLC2A4RG) had significant expression differences in MS and IS gene expression omnibus data sets. These meaningful shared genes between IS and MS shed light on the underlying genetic etiologies shared by the diseases. Our results provide a basis for in-depth genomic studies of associations between MS and IS. Frontiers Media S.A. 2020-07-03 /pmc/articles/PMC7348066/ /pubmed/32719717 http://dx.doi.org/10.3389/fgene.2020.00646 Text en Copyright © 2020 Tian, Song, Yao, Guo, Gong and Wang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Tian, Zhu Song, Yang Yao, Yang Guo, Jie Gong, Zhongying Wang, Zhiyun Genetic Etiology Shared by Multiple Sclerosis and Ischemic Stroke |
title | Genetic Etiology Shared by Multiple Sclerosis and Ischemic Stroke |
title_full | Genetic Etiology Shared by Multiple Sclerosis and Ischemic Stroke |
title_fullStr | Genetic Etiology Shared by Multiple Sclerosis and Ischemic Stroke |
title_full_unstemmed | Genetic Etiology Shared by Multiple Sclerosis and Ischemic Stroke |
title_short | Genetic Etiology Shared by Multiple Sclerosis and Ischemic Stroke |
title_sort | genetic etiology shared by multiple sclerosis and ischemic stroke |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7348066/ https://www.ncbi.nlm.nih.gov/pubmed/32719717 http://dx.doi.org/10.3389/fgene.2020.00646 |
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