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gfoRmula: An R Package for Estimating the Effects of Sustained Treatment Strategies via the Parametric g-formula

Researchers are often interested in estimating the causal effects of sustained treatment strategies, i.e., of (hypothetical) interventions involving time-varying treatments. When using observational data, estimating those effects requires adjustment for confounding. However, conventional regression...

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Detalles Bibliográficos
Autores principales: McGrath, Sean, Lin, Victoria, Zhang, Zilu, Petito, Lucia C., Logan, Roger W., Hernán, Miguel A., Young, Jessica G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7351102/
https://www.ncbi.nlm.nih.gov/pubmed/32656541
http://dx.doi.org/10.1016/j.patter.2020.100008
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author McGrath, Sean
Lin, Victoria
Zhang, Zilu
Petito, Lucia C.
Logan, Roger W.
Hernán, Miguel A.
Young, Jessica G.
author_facet McGrath, Sean
Lin, Victoria
Zhang, Zilu
Petito, Lucia C.
Logan, Roger W.
Hernán, Miguel A.
Young, Jessica G.
author_sort McGrath, Sean
collection PubMed
description Researchers are often interested in estimating the causal effects of sustained treatment strategies, i.e., of (hypothetical) interventions involving time-varying treatments. When using observational data, estimating those effects requires adjustment for confounding. However, conventional regression methods cannot appropriately adjust for confounding in the presence of treatment-confounder feedback. In contrast, estimators derived from Robins's g-formula may correctly adjust for confounding even if treatment-confounder feedback exists. The package gfoRmula implements in R one such estimator: the parametric g-formula. This estimator can be used to estimate the effects of binary or continuous time-varying treatments as well as contrasts defined by static or dynamic, deterministic, or random interventions, as well as interventions that depend on the natural value of treatment. The package accommodates survival outcomes as well as binary or continuous outcomes measured at the end of follow-up. This paper describes the gfoRmula package, along with motivating background, features, and examples.
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spelling pubmed-73511022020-07-10 gfoRmula: An R Package for Estimating the Effects of Sustained Treatment Strategies via the Parametric g-formula McGrath, Sean Lin, Victoria Zhang, Zilu Petito, Lucia C. Logan, Roger W. Hernán, Miguel A. Young, Jessica G. Patterns (N Y) Descriptor Researchers are often interested in estimating the causal effects of sustained treatment strategies, i.e., of (hypothetical) interventions involving time-varying treatments. When using observational data, estimating those effects requires adjustment for confounding. However, conventional regression methods cannot appropriately adjust for confounding in the presence of treatment-confounder feedback. In contrast, estimators derived from Robins's g-formula may correctly adjust for confounding even if treatment-confounder feedback exists. The package gfoRmula implements in R one such estimator: the parametric g-formula. This estimator can be used to estimate the effects of binary or continuous time-varying treatments as well as contrasts defined by static or dynamic, deterministic, or random interventions, as well as interventions that depend on the natural value of treatment. The package accommodates survival outcomes as well as binary or continuous outcomes measured at the end of follow-up. This paper describes the gfoRmula package, along with motivating background, features, and examples. Elsevier 2020-05-18 /pmc/articles/PMC7351102/ /pubmed/32656541 http://dx.doi.org/10.1016/j.patter.2020.100008 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Descriptor
McGrath, Sean
Lin, Victoria
Zhang, Zilu
Petito, Lucia C.
Logan, Roger W.
Hernán, Miguel A.
Young, Jessica G.
gfoRmula: An R Package for Estimating the Effects of Sustained Treatment Strategies via the Parametric g-formula
title gfoRmula: An R Package for Estimating the Effects of Sustained Treatment Strategies via the Parametric g-formula
title_full gfoRmula: An R Package for Estimating the Effects of Sustained Treatment Strategies via the Parametric g-formula
title_fullStr gfoRmula: An R Package for Estimating the Effects of Sustained Treatment Strategies via the Parametric g-formula
title_full_unstemmed gfoRmula: An R Package for Estimating the Effects of Sustained Treatment Strategies via the Parametric g-formula
title_short gfoRmula: An R Package for Estimating the Effects of Sustained Treatment Strategies via the Parametric g-formula
title_sort gformula: an r package for estimating the effects of sustained treatment strategies via the parametric g-formula
topic Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7351102/
https://www.ncbi.nlm.nih.gov/pubmed/32656541
http://dx.doi.org/10.1016/j.patter.2020.100008
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