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The transcription factor Leu3 shows differential binding behavior in response to changing leucine availability
The main transcriptional regulator of leucine biosynthesis in the yeast Saccharomyces cerevisiae is the transcription factor Leu3. It has previously been reported that Leu3 always binds to its target genes, but requires activation to induce their expression. In a recent large-scale study of high-res...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7351879/ https://www.ncbi.nlm.nih.gov/pubmed/32589214 http://dx.doi.org/10.1093/femsle/fnaa107 |
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author | Börlin, Christoph S Nielsen, Jens Siewers, Verena |
author_facet | Börlin, Christoph S Nielsen, Jens Siewers, Verena |
author_sort | Börlin, Christoph S |
collection | PubMed |
description | The main transcriptional regulator of leucine biosynthesis in the yeast Saccharomyces cerevisiae is the transcription factor Leu3. It has previously been reported that Leu3 always binds to its target genes, but requires activation to induce their expression. In a recent large-scale study of high-resolution transcription factor binding site identification, we showed that Leu3 has divergent binding sites in different cultivation conditions, thereby questioning the results of earlier studies. Here, we present a follow-up study using chromatin immunoprecipitation followed by sequencing (ChIP-seq) to investigate the influence of leucine supplementation on Leu3 binding activity and strength. With this new data set we are able to show that Leu3 exhibits changes in binding activity in response to changing levels of leucine availability. |
format | Online Article Text |
id | pubmed-7351879 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-73518792020-07-15 The transcription factor Leu3 shows differential binding behavior in response to changing leucine availability Börlin, Christoph S Nielsen, Jens Siewers, Verena FEMS Microbiol Lett Research Letter The main transcriptional regulator of leucine biosynthesis in the yeast Saccharomyces cerevisiae is the transcription factor Leu3. It has previously been reported that Leu3 always binds to its target genes, but requires activation to induce their expression. In a recent large-scale study of high-resolution transcription factor binding site identification, we showed that Leu3 has divergent binding sites in different cultivation conditions, thereby questioning the results of earlier studies. Here, we present a follow-up study using chromatin immunoprecipitation followed by sequencing (ChIP-seq) to investigate the influence of leucine supplementation on Leu3 binding activity and strength. With this new data set we are able to show that Leu3 exhibits changes in binding activity in response to changing levels of leucine availability. Oxford University Press 2020-06-26 /pmc/articles/PMC7351879/ /pubmed/32589214 http://dx.doi.org/10.1093/femsle/fnaa107 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of FEMS. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Letter Börlin, Christoph S Nielsen, Jens Siewers, Verena The transcription factor Leu3 shows differential binding behavior in response to changing leucine availability |
title | The transcription factor Leu3 shows differential binding behavior in response to changing leucine availability |
title_full | The transcription factor Leu3 shows differential binding behavior in response to changing leucine availability |
title_fullStr | The transcription factor Leu3 shows differential binding behavior in response to changing leucine availability |
title_full_unstemmed | The transcription factor Leu3 shows differential binding behavior in response to changing leucine availability |
title_short | The transcription factor Leu3 shows differential binding behavior in response to changing leucine availability |
title_sort | transcription factor leu3 shows differential binding behavior in response to changing leucine availability |
topic | Research Letter |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7351879/ https://www.ncbi.nlm.nih.gov/pubmed/32589214 http://dx.doi.org/10.1093/femsle/fnaa107 |
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