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Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection
Lung cancer is the deadliest cancer worldwide, mainly due to its advanced stage at the time of diagnosis. A non-invasive method for its early detection remains mandatory to improve patients’ survival. Plasma levels of 351 proteins were quantified by Liquid Chromatography-Parallel Reaction Monitoring...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7352295/ https://www.ncbi.nlm.nih.gov/pubmed/32575471 http://dx.doi.org/10.3390/cancers12061629 |
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author | El-Khoury, Victoria Schritz, Anna Kim, Sang-Yoon Lesur, Antoine Sertamo, Katriina Bernardin, François Petritis, Konstantinos Pirrotte, Patrick Selinsky, Cheryl Whiteaker, Jeffrey R. Zhang, Haizhen Kennedy, Jacob J. Lin, Chenwei Lee, Lik Wee Yan, Ping Tran, Nhan L. Inge, Landon J. Chalabi, Khaled Decker, Georges Bjerkvig, Rolf Paulovich, Amanda G. Berchem, Guy Kim, Yeoun Jin |
author_facet | El-Khoury, Victoria Schritz, Anna Kim, Sang-Yoon Lesur, Antoine Sertamo, Katriina Bernardin, François Petritis, Konstantinos Pirrotte, Patrick Selinsky, Cheryl Whiteaker, Jeffrey R. Zhang, Haizhen Kennedy, Jacob J. Lin, Chenwei Lee, Lik Wee Yan, Ping Tran, Nhan L. Inge, Landon J. Chalabi, Khaled Decker, Georges Bjerkvig, Rolf Paulovich, Amanda G. Berchem, Guy Kim, Yeoun Jin |
author_sort | El-Khoury, Victoria |
collection | PubMed |
description | Lung cancer is the deadliest cancer worldwide, mainly due to its advanced stage at the time of diagnosis. A non-invasive method for its early detection remains mandatory to improve patients’ survival. Plasma levels of 351 proteins were quantified by Liquid Chromatography-Parallel Reaction Monitoring (LC-PRM)-based mass spectrometry in 128 lung cancer patients and 93 healthy donors. Bootstrap sampling and least absolute shrinkage and selection operator (LASSO) penalization were used to find the best protein combination for outcome prediction. The PanelomiX platform was used to select the optimal biomarker thresholds. The panel was validated in 48 patients and 49 healthy volunteers. A 6-protein panel clearly distinguished lung cancer from healthy individuals. The panel displayed excellent performance: area under the receiver operating characteristic curve (AUC) = 0.999, positive predictive value (PPV) = 0.992, negative predictive value (NPV) = 0.989, specificity = 0.989 and sensitivity = 0.992. The panel detected lung cancer independently of the disease stage. The 6-protein panel and other sub-combinations displayed excellent results in the validation dataset. In conclusion, we identified a blood-based 6-protein panel as a diagnostic tool in lung cancer. Used as a routine test for high- and average-risk individuals, it may complement currently adopted techniques in lung cancer screening. |
format | Online Article Text |
id | pubmed-7352295 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-73522952020-07-21 Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection El-Khoury, Victoria Schritz, Anna Kim, Sang-Yoon Lesur, Antoine Sertamo, Katriina Bernardin, François Petritis, Konstantinos Pirrotte, Patrick Selinsky, Cheryl Whiteaker, Jeffrey R. Zhang, Haizhen Kennedy, Jacob J. Lin, Chenwei Lee, Lik Wee Yan, Ping Tran, Nhan L. Inge, Landon J. Chalabi, Khaled Decker, Georges Bjerkvig, Rolf Paulovich, Amanda G. Berchem, Guy Kim, Yeoun Jin Cancers (Basel) Article Lung cancer is the deadliest cancer worldwide, mainly due to its advanced stage at the time of diagnosis. A non-invasive method for its early detection remains mandatory to improve patients’ survival. Plasma levels of 351 proteins were quantified by Liquid Chromatography-Parallel Reaction Monitoring (LC-PRM)-based mass spectrometry in 128 lung cancer patients and 93 healthy donors. Bootstrap sampling and least absolute shrinkage and selection operator (LASSO) penalization were used to find the best protein combination for outcome prediction. The PanelomiX platform was used to select the optimal biomarker thresholds. The panel was validated in 48 patients and 49 healthy volunteers. A 6-protein panel clearly distinguished lung cancer from healthy individuals. The panel displayed excellent performance: area under the receiver operating characteristic curve (AUC) = 0.999, positive predictive value (PPV) = 0.992, negative predictive value (NPV) = 0.989, specificity = 0.989 and sensitivity = 0.992. The panel detected lung cancer independently of the disease stage. The 6-protein panel and other sub-combinations displayed excellent results in the validation dataset. In conclusion, we identified a blood-based 6-protein panel as a diagnostic tool in lung cancer. Used as a routine test for high- and average-risk individuals, it may complement currently adopted techniques in lung cancer screening. MDPI 2020-06-19 /pmc/articles/PMC7352295/ /pubmed/32575471 http://dx.doi.org/10.3390/cancers12061629 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article El-Khoury, Victoria Schritz, Anna Kim, Sang-Yoon Lesur, Antoine Sertamo, Katriina Bernardin, François Petritis, Konstantinos Pirrotte, Patrick Selinsky, Cheryl Whiteaker, Jeffrey R. Zhang, Haizhen Kennedy, Jacob J. Lin, Chenwei Lee, Lik Wee Yan, Ping Tran, Nhan L. Inge, Landon J. Chalabi, Khaled Decker, Georges Bjerkvig, Rolf Paulovich, Amanda G. Berchem, Guy Kim, Yeoun Jin Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection |
title | Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection |
title_full | Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection |
title_fullStr | Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection |
title_full_unstemmed | Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection |
title_short | Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection |
title_sort | identification of a blood-based protein biomarker panel for lung cancer detection |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7352295/ https://www.ncbi.nlm.nih.gov/pubmed/32575471 http://dx.doi.org/10.3390/cancers12061629 |
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