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Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection

Lung cancer is the deadliest cancer worldwide, mainly due to its advanced stage at the time of diagnosis. A non-invasive method for its early detection remains mandatory to improve patients’ survival. Plasma levels of 351 proteins were quantified by Liquid Chromatography-Parallel Reaction Monitoring...

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Autores principales: El-Khoury, Victoria, Schritz, Anna, Kim, Sang-Yoon, Lesur, Antoine, Sertamo, Katriina, Bernardin, François, Petritis, Konstantinos, Pirrotte, Patrick, Selinsky, Cheryl, Whiteaker, Jeffrey R., Zhang, Haizhen, Kennedy, Jacob J., Lin, Chenwei, Lee, Lik Wee, Yan, Ping, Tran, Nhan L., Inge, Landon J., Chalabi, Khaled, Decker, Georges, Bjerkvig, Rolf, Paulovich, Amanda G., Berchem, Guy, Kim, Yeoun Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7352295/
https://www.ncbi.nlm.nih.gov/pubmed/32575471
http://dx.doi.org/10.3390/cancers12061629
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author El-Khoury, Victoria
Schritz, Anna
Kim, Sang-Yoon
Lesur, Antoine
Sertamo, Katriina
Bernardin, François
Petritis, Konstantinos
Pirrotte, Patrick
Selinsky, Cheryl
Whiteaker, Jeffrey R.
Zhang, Haizhen
Kennedy, Jacob J.
Lin, Chenwei
Lee, Lik Wee
Yan, Ping
Tran, Nhan L.
Inge, Landon J.
Chalabi, Khaled
Decker, Georges
Bjerkvig, Rolf
Paulovich, Amanda G.
Berchem, Guy
Kim, Yeoun Jin
author_facet El-Khoury, Victoria
Schritz, Anna
Kim, Sang-Yoon
Lesur, Antoine
Sertamo, Katriina
Bernardin, François
Petritis, Konstantinos
Pirrotte, Patrick
Selinsky, Cheryl
Whiteaker, Jeffrey R.
Zhang, Haizhen
Kennedy, Jacob J.
Lin, Chenwei
Lee, Lik Wee
Yan, Ping
Tran, Nhan L.
Inge, Landon J.
Chalabi, Khaled
Decker, Georges
Bjerkvig, Rolf
Paulovich, Amanda G.
Berchem, Guy
Kim, Yeoun Jin
author_sort El-Khoury, Victoria
collection PubMed
description Lung cancer is the deadliest cancer worldwide, mainly due to its advanced stage at the time of diagnosis. A non-invasive method for its early detection remains mandatory to improve patients’ survival. Plasma levels of 351 proteins were quantified by Liquid Chromatography-Parallel Reaction Monitoring (LC-PRM)-based mass spectrometry in 128 lung cancer patients and 93 healthy donors. Bootstrap sampling and least absolute shrinkage and selection operator (LASSO) penalization were used to find the best protein combination for outcome prediction. The PanelomiX platform was used to select the optimal biomarker thresholds. The panel was validated in 48 patients and 49 healthy volunteers. A 6-protein panel clearly distinguished lung cancer from healthy individuals. The panel displayed excellent performance: area under the receiver operating characteristic curve (AUC) = 0.999, positive predictive value (PPV) = 0.992, negative predictive value (NPV) = 0.989, specificity = 0.989 and sensitivity = 0.992. The panel detected lung cancer independently of the disease stage. The 6-protein panel and other sub-combinations displayed excellent results in the validation dataset. In conclusion, we identified a blood-based 6-protein panel as a diagnostic tool in lung cancer. Used as a routine test for high- and average-risk individuals, it may complement currently adopted techniques in lung cancer screening.
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spelling pubmed-73522952020-07-21 Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection El-Khoury, Victoria Schritz, Anna Kim, Sang-Yoon Lesur, Antoine Sertamo, Katriina Bernardin, François Petritis, Konstantinos Pirrotte, Patrick Selinsky, Cheryl Whiteaker, Jeffrey R. Zhang, Haizhen Kennedy, Jacob J. Lin, Chenwei Lee, Lik Wee Yan, Ping Tran, Nhan L. Inge, Landon J. Chalabi, Khaled Decker, Georges Bjerkvig, Rolf Paulovich, Amanda G. Berchem, Guy Kim, Yeoun Jin Cancers (Basel) Article Lung cancer is the deadliest cancer worldwide, mainly due to its advanced stage at the time of diagnosis. A non-invasive method for its early detection remains mandatory to improve patients’ survival. Plasma levels of 351 proteins were quantified by Liquid Chromatography-Parallel Reaction Monitoring (LC-PRM)-based mass spectrometry in 128 lung cancer patients and 93 healthy donors. Bootstrap sampling and least absolute shrinkage and selection operator (LASSO) penalization were used to find the best protein combination for outcome prediction. The PanelomiX platform was used to select the optimal biomarker thresholds. The panel was validated in 48 patients and 49 healthy volunteers. A 6-protein panel clearly distinguished lung cancer from healthy individuals. The panel displayed excellent performance: area under the receiver operating characteristic curve (AUC) = 0.999, positive predictive value (PPV) = 0.992, negative predictive value (NPV) = 0.989, specificity = 0.989 and sensitivity = 0.992. The panel detected lung cancer independently of the disease stage. The 6-protein panel and other sub-combinations displayed excellent results in the validation dataset. In conclusion, we identified a blood-based 6-protein panel as a diagnostic tool in lung cancer. Used as a routine test for high- and average-risk individuals, it may complement currently adopted techniques in lung cancer screening. MDPI 2020-06-19 /pmc/articles/PMC7352295/ /pubmed/32575471 http://dx.doi.org/10.3390/cancers12061629 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
El-Khoury, Victoria
Schritz, Anna
Kim, Sang-Yoon
Lesur, Antoine
Sertamo, Katriina
Bernardin, François
Petritis, Konstantinos
Pirrotte, Patrick
Selinsky, Cheryl
Whiteaker, Jeffrey R.
Zhang, Haizhen
Kennedy, Jacob J.
Lin, Chenwei
Lee, Lik Wee
Yan, Ping
Tran, Nhan L.
Inge, Landon J.
Chalabi, Khaled
Decker, Georges
Bjerkvig, Rolf
Paulovich, Amanda G.
Berchem, Guy
Kim, Yeoun Jin
Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection
title Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection
title_full Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection
title_fullStr Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection
title_full_unstemmed Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection
title_short Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection
title_sort identification of a blood-based protein biomarker panel for lung cancer detection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7352295/
https://www.ncbi.nlm.nih.gov/pubmed/32575471
http://dx.doi.org/10.3390/cancers12061629
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