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Rapid and visual detection of milk vetch dwarf virus using recombinase polymerase amplification combined with lateral flow strips

BACKGROUND: Milk vetch dwarf virus (MDV) is an important ssDNA virus which causes yellowing, stunting and leaf rolling symptoms on legumes. In China, the virus causes great economic losses and has recently been found to infect tobacco. The expansion of its host range and its ability to spread rapidl...

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Autores principales: Cao, Yuhao, Yan, Dankan, Wu, Xinyang, Chen, Ziqiang, Lai, Yuchao, Lv, Lanqing, Yan, Fei, Chen, Jianping, Zheng, Hongying, Song, Xuemei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7353715/
https://www.ncbi.nlm.nih.gov/pubmed/32653001
http://dx.doi.org/10.1186/s12985-020-01371-5
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author Cao, Yuhao
Yan, Dankan
Wu, Xinyang
Chen, Ziqiang
Lai, Yuchao
Lv, Lanqing
Yan, Fei
Chen, Jianping
Zheng, Hongying
Song, Xuemei
author_facet Cao, Yuhao
Yan, Dankan
Wu, Xinyang
Chen, Ziqiang
Lai, Yuchao
Lv, Lanqing
Yan, Fei
Chen, Jianping
Zheng, Hongying
Song, Xuemei
author_sort Cao, Yuhao
collection PubMed
description BACKGROUND: Milk vetch dwarf virus (MDV) is an important ssDNA virus which causes yellowing, stunting and leaf rolling symptoms on legumes. In China, the virus causes great economic losses and has recently been found to infect tobacco. The expansion of its host range and its ability to spread rapidly has given rise to the urgent need for a sensitive, specific and rapid diagnostic assay that can assist in effective disease control. METHODS: Assays based on the polymerase chain reaction combined with lateral flow strip detection (PCR-LFS) and recombinase polymerase amplification combined with LFS (RPA-LFS) were developed targeting the coat protein (CP) gene of MDV. RESULTS: The PCR and RPA assays could detect respectively 10(3) copies or 10(1) copies of MDV by agarose gel electrophoresis. The PCR-LFS and RPA-LFS assays developed could both detect as few as 10(1) copies per reaction at 37 °C. Both methods could detect MDV in crude leaf extracts. CONCLUSIONS: The RPA-LFS assay developed is a rapid, sensitive and specific method for detecting MDV, which is convenient and has great potential for use in the field.
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spelling pubmed-73537152020-07-15 Rapid and visual detection of milk vetch dwarf virus using recombinase polymerase amplification combined with lateral flow strips Cao, Yuhao Yan, Dankan Wu, Xinyang Chen, Ziqiang Lai, Yuchao Lv, Lanqing Yan, Fei Chen, Jianping Zheng, Hongying Song, Xuemei Virol J Methodology BACKGROUND: Milk vetch dwarf virus (MDV) is an important ssDNA virus which causes yellowing, stunting and leaf rolling symptoms on legumes. In China, the virus causes great economic losses and has recently been found to infect tobacco. The expansion of its host range and its ability to spread rapidly has given rise to the urgent need for a sensitive, specific and rapid diagnostic assay that can assist in effective disease control. METHODS: Assays based on the polymerase chain reaction combined with lateral flow strip detection (PCR-LFS) and recombinase polymerase amplification combined with LFS (RPA-LFS) were developed targeting the coat protein (CP) gene of MDV. RESULTS: The PCR and RPA assays could detect respectively 10(3) copies or 10(1) copies of MDV by agarose gel electrophoresis. The PCR-LFS and RPA-LFS assays developed could both detect as few as 10(1) copies per reaction at 37 °C. Both methods could detect MDV in crude leaf extracts. CONCLUSIONS: The RPA-LFS assay developed is a rapid, sensitive and specific method for detecting MDV, which is convenient and has great potential for use in the field. BioMed Central 2020-07-11 /pmc/articles/PMC7353715/ /pubmed/32653001 http://dx.doi.org/10.1186/s12985-020-01371-5 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Methodology
Cao, Yuhao
Yan, Dankan
Wu, Xinyang
Chen, Ziqiang
Lai, Yuchao
Lv, Lanqing
Yan, Fei
Chen, Jianping
Zheng, Hongying
Song, Xuemei
Rapid and visual detection of milk vetch dwarf virus using recombinase polymerase amplification combined with lateral flow strips
title Rapid and visual detection of milk vetch dwarf virus using recombinase polymerase amplification combined with lateral flow strips
title_full Rapid and visual detection of milk vetch dwarf virus using recombinase polymerase amplification combined with lateral flow strips
title_fullStr Rapid and visual detection of milk vetch dwarf virus using recombinase polymerase amplification combined with lateral flow strips
title_full_unstemmed Rapid and visual detection of milk vetch dwarf virus using recombinase polymerase amplification combined with lateral flow strips
title_short Rapid and visual detection of milk vetch dwarf virus using recombinase polymerase amplification combined with lateral flow strips
title_sort rapid and visual detection of milk vetch dwarf virus using recombinase polymerase amplification combined with lateral flow strips
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7353715/
https://www.ncbi.nlm.nih.gov/pubmed/32653001
http://dx.doi.org/10.1186/s12985-020-01371-5
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