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Computer-assisted beat-pattern analysis and the flagellar waveforms of bovine spermatozoa
Obstructed by hurdles in information extraction, handling and processing, computer-assisted sperm analysis systems have typically not considered in detail the complex flagellar waveforms of spermatozoa, despite their defining role in cell motility. Recent developments in imaging techniques and data...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7353979/ https://www.ncbi.nlm.nih.gov/pubmed/32742702 http://dx.doi.org/10.1098/rsos.200769 |
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author | Walker, Benjamin J. Phuyal, Shiva Ishimoto, Kenta Tung, Chih-Kuan Gaffney, Eamonn A. |
author_facet | Walker, Benjamin J. Phuyal, Shiva Ishimoto, Kenta Tung, Chih-Kuan Gaffney, Eamonn A. |
author_sort | Walker, Benjamin J. |
collection | PubMed |
description | Obstructed by hurdles in information extraction, handling and processing, computer-assisted sperm analysis systems have typically not considered in detail the complex flagellar waveforms of spermatozoa, despite their defining role in cell motility. Recent developments in imaging techniques and data processing have produced significantly improved methods of waveform digitization. Here, we use these improvements to demonstrate that near-complete flagellar capture is realizable on the scale of hundreds of cells, and, further, that meaningful statistical comparisons of flagellar waveforms may be readily performed with widely available tools. Representing the advent of high-fidelity computer-assisted beat-pattern analysis, we show how such a statistical approach can distinguish between samples using complex flagellar beating patterns rather than crude summary statistics. Dimensionality-reduction techniques applied to entire samples also reveal qualitatively distinct components of the beat, and a novel data-driven methodology for the generation of representative synthetic waveform data is proposed. |
format | Online Article Text |
id | pubmed-7353979 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-73539792020-07-31 Computer-assisted beat-pattern analysis and the flagellar waveforms of bovine spermatozoa Walker, Benjamin J. Phuyal, Shiva Ishimoto, Kenta Tung, Chih-Kuan Gaffney, Eamonn A. R Soc Open Sci Biochemistry, Cellular and Molecular Biology Obstructed by hurdles in information extraction, handling and processing, computer-assisted sperm analysis systems have typically not considered in detail the complex flagellar waveforms of spermatozoa, despite their defining role in cell motility. Recent developments in imaging techniques and data processing have produced significantly improved methods of waveform digitization. Here, we use these improvements to demonstrate that near-complete flagellar capture is realizable on the scale of hundreds of cells, and, further, that meaningful statistical comparisons of flagellar waveforms may be readily performed with widely available tools. Representing the advent of high-fidelity computer-assisted beat-pattern analysis, we show how such a statistical approach can distinguish between samples using complex flagellar beating patterns rather than crude summary statistics. Dimensionality-reduction techniques applied to entire samples also reveal qualitatively distinct components of the beat, and a novel data-driven methodology for the generation of representative synthetic waveform data is proposed. The Royal Society 2020-06-17 /pmc/articles/PMC7353979/ /pubmed/32742702 http://dx.doi.org/10.1098/rsos.200769 Text en © 2020 The Authors. http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Biochemistry, Cellular and Molecular Biology Walker, Benjamin J. Phuyal, Shiva Ishimoto, Kenta Tung, Chih-Kuan Gaffney, Eamonn A. Computer-assisted beat-pattern analysis and the flagellar waveforms of bovine spermatozoa |
title | Computer-assisted beat-pattern analysis and the flagellar waveforms of bovine spermatozoa |
title_full | Computer-assisted beat-pattern analysis and the flagellar waveforms of bovine spermatozoa |
title_fullStr | Computer-assisted beat-pattern analysis and the flagellar waveforms of bovine spermatozoa |
title_full_unstemmed | Computer-assisted beat-pattern analysis and the flagellar waveforms of bovine spermatozoa |
title_short | Computer-assisted beat-pattern analysis and the flagellar waveforms of bovine spermatozoa |
title_sort | computer-assisted beat-pattern analysis and the flagellar waveforms of bovine spermatozoa |
topic | Biochemistry, Cellular and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7353979/ https://www.ncbi.nlm.nih.gov/pubmed/32742702 http://dx.doi.org/10.1098/rsos.200769 |
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