TandemTools: mapping long reads and assessing/improving assembly quality in extra-long tandem repeats

MOTIVATION: Extra-long tandem repeats (ETRs) are widespread in eukaryotic genomes and play an important role in fundamental cellular processes, such as chromosome segregation. Although emerging long-read technologies have enabled ETR assemblies, the accuracy of such assemblies is difficult to evalua...

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Detalles Bibliográficos
Autores principales: Mikheenko, Alla, Bzikadze, Andrey V, Gurevich, Alexey, Miga, Karen H, Pevzner, Pavel A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Comparative and Functional Genomics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355294/
https://www.ncbi.nlm.nih.gov/pubmed/32657355
http://dx.doi.org/10.1093/bioinformatics/btaa440

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355294/
https://www.ncbi.nlm.nih.gov/pubmed/32657355
http://dx.doi.org/10.1093/bioinformatics/btaa440

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