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Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm

Abdominal artery aneurysm (AAA) refers to abdominal aortic dilatation of 3 cm or greater. AAA is frequently underdiagnosed due to often asymptomatic character of the disease, leading to elevated mortality due to aneurysm rupture. MiRNA constitute a pool of small RNAs controlling gene expression and...

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Autores principales: Zalewski, Daniel P., Ruszel, Karol P., Stępniewski, Andrzej, Gałkowski, Dariusz, Bogucki, Jacek, Komsta, Łukasz, Kołodziej, Przemysław, Chmiel, Paulina, Zubilewicz, Tomasz, Feldo, Marcin, Kocki, Janusz, Bogucka-Kocka, Anna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355415/
https://www.ncbi.nlm.nih.gov/pubmed/32599769
http://dx.doi.org/10.3390/jcm9061974
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author Zalewski, Daniel P.
Ruszel, Karol P.
Stępniewski, Andrzej
Gałkowski, Dariusz
Bogucki, Jacek
Komsta, Łukasz
Kołodziej, Przemysław
Chmiel, Paulina
Zubilewicz, Tomasz
Feldo, Marcin
Kocki, Janusz
Bogucka-Kocka, Anna
author_facet Zalewski, Daniel P.
Ruszel, Karol P.
Stępniewski, Andrzej
Gałkowski, Dariusz
Bogucki, Jacek
Komsta, Łukasz
Kołodziej, Przemysław
Chmiel, Paulina
Zubilewicz, Tomasz
Feldo, Marcin
Kocki, Janusz
Bogucka-Kocka, Anna
author_sort Zalewski, Daniel P.
collection PubMed
description Abdominal artery aneurysm (AAA) refers to abdominal aortic dilatation of 3 cm or greater. AAA is frequently underdiagnosed due to often asymptomatic character of the disease, leading to elevated mortality due to aneurysm rupture. MiRNA constitute a pool of small RNAs controlling gene expression and is involved in many pathologic conditions in human. Targeted panel detecting altered expression of miRNA and genes involved in AAA would improve early diagnosis of this disease. In the presented study, we selected and analyzed miRNA and gene expression signatures in AAA patients. Next, generation sequencing was applied to obtain miRNA and gene-wide expression profiles from peripheral blood mononuclear cells in individuals with AAA and healthy controls. Differential expression analysis was performed using DESeq2 and uninformative variable elimination by partial least squares (UVE-PLS) methods. A total of 31 miRNAs and 51 genes were selected as the most promising biomarkers of AAA. Receiver operating characteristics (ROC) analysis showed good diagnostic ability of proposed biomarkers. Genes regulated by selected miRNAs were determined in silico and associated with functional terms closely related to cardiovascular and neurological diseases. Proposed biomarkers may be used for new diagnostic and therapeutic approaches in management of AAA. The findings will also contribute to the pool of knowledge about miRNA-dependent regulatory mechanisms involved in pathology of that disease.
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spelling pubmed-73554152020-07-23 Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm Zalewski, Daniel P. Ruszel, Karol P. Stępniewski, Andrzej Gałkowski, Dariusz Bogucki, Jacek Komsta, Łukasz Kołodziej, Przemysław Chmiel, Paulina Zubilewicz, Tomasz Feldo, Marcin Kocki, Janusz Bogucka-Kocka, Anna J Clin Med Article Abdominal artery aneurysm (AAA) refers to abdominal aortic dilatation of 3 cm or greater. AAA is frequently underdiagnosed due to often asymptomatic character of the disease, leading to elevated mortality due to aneurysm rupture. MiRNA constitute a pool of small RNAs controlling gene expression and is involved in many pathologic conditions in human. Targeted panel detecting altered expression of miRNA and genes involved in AAA would improve early diagnosis of this disease. In the presented study, we selected and analyzed miRNA and gene expression signatures in AAA patients. Next, generation sequencing was applied to obtain miRNA and gene-wide expression profiles from peripheral blood mononuclear cells in individuals with AAA and healthy controls. Differential expression analysis was performed using DESeq2 and uninformative variable elimination by partial least squares (UVE-PLS) methods. A total of 31 miRNAs and 51 genes were selected as the most promising biomarkers of AAA. Receiver operating characteristics (ROC) analysis showed good diagnostic ability of proposed biomarkers. Genes regulated by selected miRNAs were determined in silico and associated with functional terms closely related to cardiovascular and neurological diseases. Proposed biomarkers may be used for new diagnostic and therapeutic approaches in management of AAA. The findings will also contribute to the pool of knowledge about miRNA-dependent regulatory mechanisms involved in pathology of that disease. MDPI 2020-06-24 /pmc/articles/PMC7355415/ /pubmed/32599769 http://dx.doi.org/10.3390/jcm9061974 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zalewski, Daniel P.
Ruszel, Karol P.
Stępniewski, Andrzej
Gałkowski, Dariusz
Bogucki, Jacek
Komsta, Łukasz
Kołodziej, Przemysław
Chmiel, Paulina
Zubilewicz, Tomasz
Feldo, Marcin
Kocki, Janusz
Bogucka-Kocka, Anna
Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm
title Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm
title_full Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm
title_fullStr Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm
title_full_unstemmed Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm
title_short Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm
title_sort dysregulation of microrna modulatory network in abdominal aortic aneurysm
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355415/
https://www.ncbi.nlm.nih.gov/pubmed/32599769
http://dx.doi.org/10.3390/jcm9061974
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