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Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm
Abdominal artery aneurysm (AAA) refers to abdominal aortic dilatation of 3 cm or greater. AAA is frequently underdiagnosed due to often asymptomatic character of the disease, leading to elevated mortality due to aneurysm rupture. MiRNA constitute a pool of small RNAs controlling gene expression and...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355415/ https://www.ncbi.nlm.nih.gov/pubmed/32599769 http://dx.doi.org/10.3390/jcm9061974 |
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author | Zalewski, Daniel P. Ruszel, Karol P. Stępniewski, Andrzej Gałkowski, Dariusz Bogucki, Jacek Komsta, Łukasz Kołodziej, Przemysław Chmiel, Paulina Zubilewicz, Tomasz Feldo, Marcin Kocki, Janusz Bogucka-Kocka, Anna |
author_facet | Zalewski, Daniel P. Ruszel, Karol P. Stępniewski, Andrzej Gałkowski, Dariusz Bogucki, Jacek Komsta, Łukasz Kołodziej, Przemysław Chmiel, Paulina Zubilewicz, Tomasz Feldo, Marcin Kocki, Janusz Bogucka-Kocka, Anna |
author_sort | Zalewski, Daniel P. |
collection | PubMed |
description | Abdominal artery aneurysm (AAA) refers to abdominal aortic dilatation of 3 cm or greater. AAA is frequently underdiagnosed due to often asymptomatic character of the disease, leading to elevated mortality due to aneurysm rupture. MiRNA constitute a pool of small RNAs controlling gene expression and is involved in many pathologic conditions in human. Targeted panel detecting altered expression of miRNA and genes involved in AAA would improve early diagnosis of this disease. In the presented study, we selected and analyzed miRNA and gene expression signatures in AAA patients. Next, generation sequencing was applied to obtain miRNA and gene-wide expression profiles from peripheral blood mononuclear cells in individuals with AAA and healthy controls. Differential expression analysis was performed using DESeq2 and uninformative variable elimination by partial least squares (UVE-PLS) methods. A total of 31 miRNAs and 51 genes were selected as the most promising biomarkers of AAA. Receiver operating characteristics (ROC) analysis showed good diagnostic ability of proposed biomarkers. Genes regulated by selected miRNAs were determined in silico and associated with functional terms closely related to cardiovascular and neurological diseases. Proposed biomarkers may be used for new diagnostic and therapeutic approaches in management of AAA. The findings will also contribute to the pool of knowledge about miRNA-dependent regulatory mechanisms involved in pathology of that disease. |
format | Online Article Text |
id | pubmed-7355415 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-73554152020-07-23 Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm Zalewski, Daniel P. Ruszel, Karol P. Stępniewski, Andrzej Gałkowski, Dariusz Bogucki, Jacek Komsta, Łukasz Kołodziej, Przemysław Chmiel, Paulina Zubilewicz, Tomasz Feldo, Marcin Kocki, Janusz Bogucka-Kocka, Anna J Clin Med Article Abdominal artery aneurysm (AAA) refers to abdominal aortic dilatation of 3 cm or greater. AAA is frequently underdiagnosed due to often asymptomatic character of the disease, leading to elevated mortality due to aneurysm rupture. MiRNA constitute a pool of small RNAs controlling gene expression and is involved in many pathologic conditions in human. Targeted panel detecting altered expression of miRNA and genes involved in AAA would improve early diagnosis of this disease. In the presented study, we selected and analyzed miRNA and gene expression signatures in AAA patients. Next, generation sequencing was applied to obtain miRNA and gene-wide expression profiles from peripheral blood mononuclear cells in individuals with AAA and healthy controls. Differential expression analysis was performed using DESeq2 and uninformative variable elimination by partial least squares (UVE-PLS) methods. A total of 31 miRNAs and 51 genes were selected as the most promising biomarkers of AAA. Receiver operating characteristics (ROC) analysis showed good diagnostic ability of proposed biomarkers. Genes regulated by selected miRNAs were determined in silico and associated with functional terms closely related to cardiovascular and neurological diseases. Proposed biomarkers may be used for new diagnostic and therapeutic approaches in management of AAA. The findings will also contribute to the pool of knowledge about miRNA-dependent regulatory mechanisms involved in pathology of that disease. MDPI 2020-06-24 /pmc/articles/PMC7355415/ /pubmed/32599769 http://dx.doi.org/10.3390/jcm9061974 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zalewski, Daniel P. Ruszel, Karol P. Stępniewski, Andrzej Gałkowski, Dariusz Bogucki, Jacek Komsta, Łukasz Kołodziej, Przemysław Chmiel, Paulina Zubilewicz, Tomasz Feldo, Marcin Kocki, Janusz Bogucka-Kocka, Anna Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm |
title | Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm |
title_full | Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm |
title_fullStr | Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm |
title_full_unstemmed | Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm |
title_short | Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm |
title_sort | dysregulation of microrna modulatory network in abdominal aortic aneurysm |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355415/ https://www.ncbi.nlm.nih.gov/pubmed/32599769 http://dx.doi.org/10.3390/jcm9061974 |
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