Cargando…
Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching
Soil physiochemical properties are regulated by cropping practices, but little is known about how tillage influences soil microbial community diversity and functions. Here, we assessed soil bacterial community assembly and functional profiles in relation to tillage. Soils, collected in 2018 from a 1...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355473/ https://www.ncbi.nlm.nih.gov/pubmed/32498450 http://dx.doi.org/10.3390/microorganisms8060836 |
_version_ | 1783558283609505792 |
---|---|
author | Liu, Chang Li, Lingling Xie, Junhong Coulter, Jeffrey A. Zhang, Renzhi Luo, Zhuzhu Cai, Liqun Wang, Linlin Gopalakrishnan, Subramaniam |
author_facet | Liu, Chang Li, Lingling Xie, Junhong Coulter, Jeffrey A. Zhang, Renzhi Luo, Zhuzhu Cai, Liqun Wang, Linlin Gopalakrishnan, Subramaniam |
author_sort | Liu, Chang |
collection | PubMed |
description | Soil physiochemical properties are regulated by cropping practices, but little is known about how tillage influences soil microbial community diversity and functions. Here, we assessed soil bacterial community assembly and functional profiles in relation to tillage. Soils, collected in 2018 from a 17-year field experiment in northwestern China, were analyzed using high-throughput sequencing and the PICRUSt approach. The taxonomic diversity of bacterial communities was dominated primarily by the phyla Proteobacteria (32–56%), Bacteroidetes (12–33%), and Actinobacteria (17–27%). Alpha diversity (Chao1, Shannon, Simpson, and operational taxonomic unit (OTU) richness) was highest under no-tillage with crop residue removed (NT). Crop residue retention on the soil surface (NTS) or incorporated into soil (TS) promoted the abundance of Proteobacteria by 16 to 74% as compared to conventional tillage (T). Tillage practices mainly affected the pathways of soil metabolism, genetic information processing, and environmental information processing. Soil organic C and NH(4)–N were the principal contributors to the diversity and composition of soil microbiota, whereas soil pH, total nitrogen, total P, and moisture had little effect. Our results suggest that long-term conservation practices with no-tillage and crop residue retention shape soil bacterial community composition through modifying soil physicochemical properties and promoting the metabolic function of soil microbiomes. |
format | Online Article Text |
id | pubmed-7355473 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-73554732020-07-23 Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching Liu, Chang Li, Lingling Xie, Junhong Coulter, Jeffrey A. Zhang, Renzhi Luo, Zhuzhu Cai, Liqun Wang, Linlin Gopalakrishnan, Subramaniam Microorganisms Article Soil physiochemical properties are regulated by cropping practices, but little is known about how tillage influences soil microbial community diversity and functions. Here, we assessed soil bacterial community assembly and functional profiles in relation to tillage. Soils, collected in 2018 from a 17-year field experiment in northwestern China, were analyzed using high-throughput sequencing and the PICRUSt approach. The taxonomic diversity of bacterial communities was dominated primarily by the phyla Proteobacteria (32–56%), Bacteroidetes (12–33%), and Actinobacteria (17–27%). Alpha diversity (Chao1, Shannon, Simpson, and operational taxonomic unit (OTU) richness) was highest under no-tillage with crop residue removed (NT). Crop residue retention on the soil surface (NTS) or incorporated into soil (TS) promoted the abundance of Proteobacteria by 16 to 74% as compared to conventional tillage (T). Tillage practices mainly affected the pathways of soil metabolism, genetic information processing, and environmental information processing. Soil organic C and NH(4)–N were the principal contributors to the diversity and composition of soil microbiota, whereas soil pH, total nitrogen, total P, and moisture had little effect. Our results suggest that long-term conservation practices with no-tillage and crop residue retention shape soil bacterial community composition through modifying soil physicochemical properties and promoting the metabolic function of soil microbiomes. MDPI 2020-06-02 /pmc/articles/PMC7355473/ /pubmed/32498450 http://dx.doi.org/10.3390/microorganisms8060836 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Liu, Chang Li, Lingling Xie, Junhong Coulter, Jeffrey A. Zhang, Renzhi Luo, Zhuzhu Cai, Liqun Wang, Linlin Gopalakrishnan, Subramaniam Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching |
title | Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching |
title_full | Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching |
title_fullStr | Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching |
title_full_unstemmed | Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching |
title_short | Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching |
title_sort | soil bacterial diversity and potential functions are regulated by long-term conservation tillage and straw mulching |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355473/ https://www.ncbi.nlm.nih.gov/pubmed/32498450 http://dx.doi.org/10.3390/microorganisms8060836 |
work_keys_str_mv | AT liuchang soilbacterialdiversityandpotentialfunctionsareregulatedbylongtermconservationtillageandstrawmulching AT lilingling soilbacterialdiversityandpotentialfunctionsareregulatedbylongtermconservationtillageandstrawmulching AT xiejunhong soilbacterialdiversityandpotentialfunctionsareregulatedbylongtermconservationtillageandstrawmulching AT coulterjeffreya soilbacterialdiversityandpotentialfunctionsareregulatedbylongtermconservationtillageandstrawmulching AT zhangrenzhi soilbacterialdiversityandpotentialfunctionsareregulatedbylongtermconservationtillageandstrawmulching AT luozhuzhu soilbacterialdiversityandpotentialfunctionsareregulatedbylongtermconservationtillageandstrawmulching AT cailiqun soilbacterialdiversityandpotentialfunctionsareregulatedbylongtermconservationtillageandstrawmulching AT wanglinlin soilbacterialdiversityandpotentialfunctionsareregulatedbylongtermconservationtillageandstrawmulching AT gopalakrishnansubramaniam soilbacterialdiversityandpotentialfunctionsareregulatedbylongtermconservationtillageandstrawmulching |