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Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching

Soil physiochemical properties are regulated by cropping practices, but little is known about how tillage influences soil microbial community diversity and functions. Here, we assessed soil bacterial community assembly and functional profiles in relation to tillage. Soils, collected in 2018 from a 1...

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Autores principales: Liu, Chang, Li, Lingling, Xie, Junhong, Coulter, Jeffrey A., Zhang, Renzhi, Luo, Zhuzhu, Cai, Liqun, Wang, Linlin, Gopalakrishnan, Subramaniam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355473/
https://www.ncbi.nlm.nih.gov/pubmed/32498450
http://dx.doi.org/10.3390/microorganisms8060836
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author Liu, Chang
Li, Lingling
Xie, Junhong
Coulter, Jeffrey A.
Zhang, Renzhi
Luo, Zhuzhu
Cai, Liqun
Wang, Linlin
Gopalakrishnan, Subramaniam
author_facet Liu, Chang
Li, Lingling
Xie, Junhong
Coulter, Jeffrey A.
Zhang, Renzhi
Luo, Zhuzhu
Cai, Liqun
Wang, Linlin
Gopalakrishnan, Subramaniam
author_sort Liu, Chang
collection PubMed
description Soil physiochemical properties are regulated by cropping practices, but little is known about how tillage influences soil microbial community diversity and functions. Here, we assessed soil bacterial community assembly and functional profiles in relation to tillage. Soils, collected in 2018 from a 17-year field experiment in northwestern China, were analyzed using high-throughput sequencing and the PICRUSt approach. The taxonomic diversity of bacterial communities was dominated primarily by the phyla Proteobacteria (32–56%), Bacteroidetes (12–33%), and Actinobacteria (17–27%). Alpha diversity (Chao1, Shannon, Simpson, and operational taxonomic unit (OTU) richness) was highest under no-tillage with crop residue removed (NT). Crop residue retention on the soil surface (NTS) or incorporated into soil (TS) promoted the abundance of Proteobacteria by 16 to 74% as compared to conventional tillage (T). Tillage practices mainly affected the pathways of soil metabolism, genetic information processing, and environmental information processing. Soil organic C and NH(4)–N were the principal contributors to the diversity and composition of soil microbiota, whereas soil pH, total nitrogen, total P, and moisture had little effect. Our results suggest that long-term conservation practices with no-tillage and crop residue retention shape soil bacterial community composition through modifying soil physicochemical properties and promoting the metabolic function of soil microbiomes.
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spelling pubmed-73554732020-07-23 Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching Liu, Chang Li, Lingling Xie, Junhong Coulter, Jeffrey A. Zhang, Renzhi Luo, Zhuzhu Cai, Liqun Wang, Linlin Gopalakrishnan, Subramaniam Microorganisms Article Soil physiochemical properties are regulated by cropping practices, but little is known about how tillage influences soil microbial community diversity and functions. Here, we assessed soil bacterial community assembly and functional profiles in relation to tillage. Soils, collected in 2018 from a 17-year field experiment in northwestern China, were analyzed using high-throughput sequencing and the PICRUSt approach. The taxonomic diversity of bacterial communities was dominated primarily by the phyla Proteobacteria (32–56%), Bacteroidetes (12–33%), and Actinobacteria (17–27%). Alpha diversity (Chao1, Shannon, Simpson, and operational taxonomic unit (OTU) richness) was highest under no-tillage with crop residue removed (NT). Crop residue retention on the soil surface (NTS) or incorporated into soil (TS) promoted the abundance of Proteobacteria by 16 to 74% as compared to conventional tillage (T). Tillage practices mainly affected the pathways of soil metabolism, genetic information processing, and environmental information processing. Soil organic C and NH(4)–N were the principal contributors to the diversity and composition of soil microbiota, whereas soil pH, total nitrogen, total P, and moisture had little effect. Our results suggest that long-term conservation practices with no-tillage and crop residue retention shape soil bacterial community composition through modifying soil physicochemical properties and promoting the metabolic function of soil microbiomes. MDPI 2020-06-02 /pmc/articles/PMC7355473/ /pubmed/32498450 http://dx.doi.org/10.3390/microorganisms8060836 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Liu, Chang
Li, Lingling
Xie, Junhong
Coulter, Jeffrey A.
Zhang, Renzhi
Luo, Zhuzhu
Cai, Liqun
Wang, Linlin
Gopalakrishnan, Subramaniam
Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching
title Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching
title_full Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching
title_fullStr Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching
title_full_unstemmed Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching
title_short Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw Mulching
title_sort soil bacterial diversity and potential functions are regulated by long-term conservation tillage and straw mulching
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355473/
https://www.ncbi.nlm.nih.gov/pubmed/32498450
http://dx.doi.org/10.3390/microorganisms8060836
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