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Assessing Onchocerciasis Subcriticality from Pre-Intervention Cross-Sectional Surveys

Elimination of an infectious disease requires subcritical transmission, or a reproductive number less than one, and can be assessed with cross-sectional surveys conducted by neglected tropical disease programs. Here, we assess the distribution of onchocerciasis prevalence taken from surveys across s...

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Autores principales: Kelly, John Daniel, Rebollo Polo, Maria, Marie Zoure, Honorat Gustave, Oldenburg, Catherine E., Keenan, Jeremy D., Porco, Travis C., Lietman, Thomas M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The American Society of Tropical Medicine and Hygiene 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7356432/
https://www.ncbi.nlm.nih.gov/pubmed/32458796
http://dx.doi.org/10.4269/ajtmh.19-0758
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author Kelly, John Daniel
Rebollo Polo, Maria
Marie Zoure, Honorat Gustave
Oldenburg, Catherine E.
Keenan, Jeremy D.
Porco, Travis C.
Lietman, Thomas M.
author_facet Kelly, John Daniel
Rebollo Polo, Maria
Marie Zoure, Honorat Gustave
Oldenburg, Catherine E.
Keenan, Jeremy D.
Porco, Travis C.
Lietman, Thomas M.
author_sort Kelly, John Daniel
collection PubMed
description Elimination of an infectious disease requires subcritical transmission, or a reproductive number less than one, and can be assessed with cross-sectional surveys conducted by neglected tropical disease programs. Here, we assess the distribution of onchocerciasis prevalence taken from surveys across sub-Saharan Africa before the initiation of ivermectin in mass drug administrations. Pre-intervention nodular palpation cross-sectional surveys were available from 15 countries in the Expanded Special Project for Elimination of Neglected Tropical Diseases (ESPEN) database. We determined whether the distribution of the prevalence over communities in an area was consistent with a geometric distribution, which previous studies have suggested indicates a subcritical disease. If not, we fitted a negative binominal distribution (hypothetically supercritical) or a mixture of two distributions: geometric (hypothetically subcritical) and Poisson (hypothetically supercritical). The overall distribution of community-level onchocerciasis prevalence estimates from the ESPEN dataset from 2005 to 2014 was not consistent with a geometric distribution. By contrast, data from several countries and parts of countries were consistent with the geometric distribution, for example, some areas within Nigeria and Angola. Even if the geometric distribution suggested pre-intervention subcriticality in more localized geographical areas, our model using pooled survey data of all geographic areas suggests that the entire pre-intervention prevalence does not fit a geometric distribution. Further work will be required to confirm the significance of a geometric distribution for onchocerciasis.
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spelling pubmed-73564322020-07-20 Assessing Onchocerciasis Subcriticality from Pre-Intervention Cross-Sectional Surveys Kelly, John Daniel Rebollo Polo, Maria Marie Zoure, Honorat Gustave Oldenburg, Catherine E. Keenan, Jeremy D. Porco, Travis C. Lietman, Thomas M. Am J Trop Med Hyg Articles Elimination of an infectious disease requires subcritical transmission, or a reproductive number less than one, and can be assessed with cross-sectional surveys conducted by neglected tropical disease programs. Here, we assess the distribution of onchocerciasis prevalence taken from surveys across sub-Saharan Africa before the initiation of ivermectin in mass drug administrations. Pre-intervention nodular palpation cross-sectional surveys were available from 15 countries in the Expanded Special Project for Elimination of Neglected Tropical Diseases (ESPEN) database. We determined whether the distribution of the prevalence over communities in an area was consistent with a geometric distribution, which previous studies have suggested indicates a subcritical disease. If not, we fitted a negative binominal distribution (hypothetically supercritical) or a mixture of two distributions: geometric (hypothetically subcritical) and Poisson (hypothetically supercritical). The overall distribution of community-level onchocerciasis prevalence estimates from the ESPEN dataset from 2005 to 2014 was not consistent with a geometric distribution. By contrast, data from several countries and parts of countries were consistent with the geometric distribution, for example, some areas within Nigeria and Angola. Even if the geometric distribution suggested pre-intervention subcriticality in more localized geographical areas, our model using pooled survey data of all geographic areas suggests that the entire pre-intervention prevalence does not fit a geometric distribution. Further work will be required to confirm the significance of a geometric distribution for onchocerciasis. The American Society of Tropical Medicine and Hygiene 2020-07 2020-05-26 /pmc/articles/PMC7356432/ /pubmed/32458796 http://dx.doi.org/10.4269/ajtmh.19-0758 Text en © The American Society of Tropical Medicine and Hygiene This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Articles
Kelly, John Daniel
Rebollo Polo, Maria
Marie Zoure, Honorat Gustave
Oldenburg, Catherine E.
Keenan, Jeremy D.
Porco, Travis C.
Lietman, Thomas M.
Assessing Onchocerciasis Subcriticality from Pre-Intervention Cross-Sectional Surveys
title Assessing Onchocerciasis Subcriticality from Pre-Intervention Cross-Sectional Surveys
title_full Assessing Onchocerciasis Subcriticality from Pre-Intervention Cross-Sectional Surveys
title_fullStr Assessing Onchocerciasis Subcriticality from Pre-Intervention Cross-Sectional Surveys
title_full_unstemmed Assessing Onchocerciasis Subcriticality from Pre-Intervention Cross-Sectional Surveys
title_short Assessing Onchocerciasis Subcriticality from Pre-Intervention Cross-Sectional Surveys
title_sort assessing onchocerciasis subcriticality from pre-intervention cross-sectional surveys
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7356432/
https://www.ncbi.nlm.nih.gov/pubmed/32458796
http://dx.doi.org/10.4269/ajtmh.19-0758
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