Cargando…

Identification of Human Leukotriene A4 Hydrolase Inhibitors Using Structure-Based Pharmacophore Modeling and Molecular Docking

Leukotriene B4 (LTB4) is a potent, proinflammatory lipid mediator implicated in the pathologies of an array of inflammatory diseases and cancer. The biosynthesis of LTB4 is regulated by the leukotriene A4 hydrolase (LTA(4)H). Compounds capable of limiting the formation of LTB4, through selective inh...

Descripción completa

Detalles Bibliográficos
Autores principales: Audat, Suaad A., Al-Shar’i, Nizar A., Al-Oudat, Buthina A., Bryant-Friedrich, Amanda, Bedi, Mel F., Zayed, Aref L., Al-Balas, Qosay A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7356593/
https://www.ncbi.nlm.nih.gov/pubmed/32580506
http://dx.doi.org/10.3390/molecules25122871
_version_ 1783558525685858304
author Audat, Suaad A.
Al-Shar’i, Nizar A.
Al-Oudat, Buthina A.
Bryant-Friedrich, Amanda
Bedi, Mel F.
Zayed, Aref L.
Al-Balas, Qosay A.
author_facet Audat, Suaad A.
Al-Shar’i, Nizar A.
Al-Oudat, Buthina A.
Bryant-Friedrich, Amanda
Bedi, Mel F.
Zayed, Aref L.
Al-Balas, Qosay A.
author_sort Audat, Suaad A.
collection PubMed
description Leukotriene B4 (LTB4) is a potent, proinflammatory lipid mediator implicated in the pathologies of an array of inflammatory diseases and cancer. The biosynthesis of LTB4 is regulated by the leukotriene A4 hydrolase (LTA(4)H). Compounds capable of limiting the formation of LTB4, through selective inhibition of LTA(4)H, are expected to provide potent anti-inflammatory and anti-cancer agents. The aim of the current study is to obtain potential LTA(4)H inhibitors using computer-aided drug design. A hybrid 3D structure-based pharmacophore model was generated based on the crystal structure of LTA(4)H in complex with bestatin. The generated pharmacophore was used in a virtual screen of the Maybridge database. The retrieved hits were extensively filtered, then docked into the active site of the enzyme. Finally, they were consensually scored to yield five hits as potential LTA(4)H inhibitors. Consequently, the selected hits were purchased and their biological activity assessed in vitro against the epoxide hydrolase activity of LTA(4)H. The results were very promising, with the most active compound showing 73.6% inhibition of the basal epoxide hydrolase activity of LTA(4)H. The results from this exploratory study provide valuable information for the design and development of more potent and selective inhibitors.
format Online
Article
Text
id pubmed-7356593
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-73565932020-07-22 Identification of Human Leukotriene A4 Hydrolase Inhibitors Using Structure-Based Pharmacophore Modeling and Molecular Docking Audat, Suaad A. Al-Shar’i, Nizar A. Al-Oudat, Buthina A. Bryant-Friedrich, Amanda Bedi, Mel F. Zayed, Aref L. Al-Balas, Qosay A. Molecules Article Leukotriene B4 (LTB4) is a potent, proinflammatory lipid mediator implicated in the pathologies of an array of inflammatory diseases and cancer. The biosynthesis of LTB4 is regulated by the leukotriene A4 hydrolase (LTA(4)H). Compounds capable of limiting the formation of LTB4, through selective inhibition of LTA(4)H, are expected to provide potent anti-inflammatory and anti-cancer agents. The aim of the current study is to obtain potential LTA(4)H inhibitors using computer-aided drug design. A hybrid 3D structure-based pharmacophore model was generated based on the crystal structure of LTA(4)H in complex with bestatin. The generated pharmacophore was used in a virtual screen of the Maybridge database. The retrieved hits were extensively filtered, then docked into the active site of the enzyme. Finally, they were consensually scored to yield five hits as potential LTA(4)H inhibitors. Consequently, the selected hits were purchased and their biological activity assessed in vitro against the epoxide hydrolase activity of LTA(4)H. The results were very promising, with the most active compound showing 73.6% inhibition of the basal epoxide hydrolase activity of LTA(4)H. The results from this exploratory study provide valuable information for the design and development of more potent and selective inhibitors. MDPI 2020-06-22 /pmc/articles/PMC7356593/ /pubmed/32580506 http://dx.doi.org/10.3390/molecules25122871 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Audat, Suaad A.
Al-Shar’i, Nizar A.
Al-Oudat, Buthina A.
Bryant-Friedrich, Amanda
Bedi, Mel F.
Zayed, Aref L.
Al-Balas, Qosay A.
Identification of Human Leukotriene A4 Hydrolase Inhibitors Using Structure-Based Pharmacophore Modeling and Molecular Docking
title Identification of Human Leukotriene A4 Hydrolase Inhibitors Using Structure-Based Pharmacophore Modeling and Molecular Docking
title_full Identification of Human Leukotriene A4 Hydrolase Inhibitors Using Structure-Based Pharmacophore Modeling and Molecular Docking
title_fullStr Identification of Human Leukotriene A4 Hydrolase Inhibitors Using Structure-Based Pharmacophore Modeling and Molecular Docking
title_full_unstemmed Identification of Human Leukotriene A4 Hydrolase Inhibitors Using Structure-Based Pharmacophore Modeling and Molecular Docking
title_short Identification of Human Leukotriene A4 Hydrolase Inhibitors Using Structure-Based Pharmacophore Modeling and Molecular Docking
title_sort identification of human leukotriene a4 hydrolase inhibitors using structure-based pharmacophore modeling and molecular docking
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7356593/
https://www.ncbi.nlm.nih.gov/pubmed/32580506
http://dx.doi.org/10.3390/molecules25122871
work_keys_str_mv AT audatsuaada identificationofhumanleukotrienea4hydrolaseinhibitorsusingstructurebasedpharmacophoremodelingandmoleculardocking
AT alsharinizara identificationofhumanleukotrienea4hydrolaseinhibitorsusingstructurebasedpharmacophoremodelingandmoleculardocking
AT aloudatbuthinaa identificationofhumanleukotrienea4hydrolaseinhibitorsusingstructurebasedpharmacophoremodelingandmoleculardocking
AT bryantfriedrichamanda identificationofhumanleukotrienea4hydrolaseinhibitorsusingstructurebasedpharmacophoremodelingandmoleculardocking
AT bedimelf identificationofhumanleukotrienea4hydrolaseinhibitorsusingstructurebasedpharmacophoremodelingandmoleculardocking
AT zayedarefl identificationofhumanleukotrienea4hydrolaseinhibitorsusingstructurebasedpharmacophoremodelingandmoleculardocking
AT albalasqosaya identificationofhumanleukotrienea4hydrolaseinhibitorsusingstructurebasedpharmacophoremodelingandmoleculardocking