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Semi-supervised Adversarial Domain Adaptation for Seagrass Detection Using Multispectral Images in Coastal Areas

Seagrass form the basis for critically important marine ecosystems. Previously, we implemented a deep convolutional neural network (CNN) model to detect seagrass in multispectral satellite images of three coastal habitats in northern Florida. However, a deep CNN model trained at one location usually...

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Autores principales: Islam, Kazi Aminul, Hill, Victoria, Schaeffer, Blake, Zimmerman, Richard, Li, Jiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7357679/
https://www.ncbi.nlm.nih.gov/pubmed/32685664
http://dx.doi.org/10.1007/s41019-020-00126-0
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author Islam, Kazi Aminul
Hill, Victoria
Schaeffer, Blake
Zimmerman, Richard
Li, Jiang
author_facet Islam, Kazi Aminul
Hill, Victoria
Schaeffer, Blake
Zimmerman, Richard
Li, Jiang
author_sort Islam, Kazi Aminul
collection PubMed
description Seagrass form the basis for critically important marine ecosystems. Previously, we implemented a deep convolutional neural network (CNN) model to detect seagrass in multispectral satellite images of three coastal habitats in northern Florida. However, a deep CNN model trained at one location usually does not generalize to other locations due to data distribution shifts. In this paper, we developed a semi-supervised domain adaptation method to generalize a trained deep CNN model to other locations for seagrass detection. First, we utilized a generative adversarial network loss to align marginal data distribution between source domain and target domain using unlabeled data from both data domains. Second, we used a few labelled samples from the target domain to align class specific data distributions between the two domains, based on the contrastive semantic alignment loss. We achieved the best results in 28 out of 36 scenarios as compared to other state-of-the-art domain adaptation methods.
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spelling pubmed-73576792020-07-16 Semi-supervised Adversarial Domain Adaptation for Seagrass Detection Using Multispectral Images in Coastal Areas Islam, Kazi Aminul Hill, Victoria Schaeffer, Blake Zimmerman, Richard Li, Jiang Data Sci Eng Article Seagrass form the basis for critically important marine ecosystems. Previously, we implemented a deep convolutional neural network (CNN) model to detect seagrass in multispectral satellite images of three coastal habitats in northern Florida. However, a deep CNN model trained at one location usually does not generalize to other locations due to data distribution shifts. In this paper, we developed a semi-supervised domain adaptation method to generalize a trained deep CNN model to other locations for seagrass detection. First, we utilized a generative adversarial network loss to align marginal data distribution between source domain and target domain using unlabeled data from both data domains. Second, we used a few labelled samples from the target domain to align class specific data distributions between the two domains, based on the contrastive semantic alignment loss. We achieved the best results in 28 out of 36 scenarios as compared to other state-of-the-art domain adaptation methods. Springer Berlin Heidelberg 2020-06-02 2020 /pmc/articles/PMC7357679/ /pubmed/32685664 http://dx.doi.org/10.1007/s41019-020-00126-0 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Islam, Kazi Aminul
Hill, Victoria
Schaeffer, Blake
Zimmerman, Richard
Li, Jiang
Semi-supervised Adversarial Domain Adaptation for Seagrass Detection Using Multispectral Images in Coastal Areas
title Semi-supervised Adversarial Domain Adaptation for Seagrass Detection Using Multispectral Images in Coastal Areas
title_full Semi-supervised Adversarial Domain Adaptation for Seagrass Detection Using Multispectral Images in Coastal Areas
title_fullStr Semi-supervised Adversarial Domain Adaptation for Seagrass Detection Using Multispectral Images in Coastal Areas
title_full_unstemmed Semi-supervised Adversarial Domain Adaptation for Seagrass Detection Using Multispectral Images in Coastal Areas
title_short Semi-supervised Adversarial Domain Adaptation for Seagrass Detection Using Multispectral Images in Coastal Areas
title_sort semi-supervised adversarial domain adaptation for seagrass detection using multispectral images in coastal areas
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7357679/
https://www.ncbi.nlm.nih.gov/pubmed/32685664
http://dx.doi.org/10.1007/s41019-020-00126-0
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