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The prognostic value and potential mechanism of Matrix Metalloproteinases among Prostate Cancer

Background: Matrix Metalloproteinases (MMPs) play an indispensable role in the initial alteration and development of PCa. We tried to generate an MMP-related prognostic signature (MMPS) in prostate cancer (PCa). Methods: TCGA-PRAD, MSKCC/GSE21032, GSE116918, GSE70769 cohorts were enrolled to assess...

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Autores principales: Geng, Xinyu, Chen, Chunyang, Huang, Yuhua, Hou, Jianquan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7359399/
https://www.ncbi.nlm.nih.gov/pubmed/32669958
http://dx.doi.org/10.7150/ijms.46780
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author Geng, Xinyu
Chen, Chunyang
Huang, Yuhua
Hou, Jianquan
author_facet Geng, Xinyu
Chen, Chunyang
Huang, Yuhua
Hou, Jianquan
author_sort Geng, Xinyu
collection PubMed
description Background: Matrix Metalloproteinases (MMPs) play an indispensable role in the initial alteration and development of PCa. We tried to generate an MMP-related prognostic signature (MMPS) in prostate cancer (PCa). Methods: TCGA-PRAD, MSKCC/GSE21032, GSE116918, GSE70769 cohorts were enrolled to assess the prognostic value of MMPs. The least absolute shrinkage and selection operator (LASSO) Cox regression was employed to generate the MMPS signature. The log-rank test and Kaplan-Meier (K-M) survival curve were applied to show the difference RFS, The receiver operating characteristic (ROC) curve and area under the ROC curve (AUC) was plotted to predict the accuracy of signature. CIBERSORT was conducted to analyze the different immune infiltration in MMPS-H and MMPS-L groups. Potential signaling pathways activated in the MMPS-H groups by Metascape. Results: MMP1, MMP7, MMP11, MMP24 and MMP26 were selected by LASSO regression and established the MMPS predict signature. The MMPS showed the high prognostic value in TCGA-PRAD training cohort (AUC=0.714) and validation cohorts (GSE116918: AUC=0.976, GSE70769: AUC=0.738, MSKCC: AUC=0.793). Pid integrin1 pathway, G2M checkpoint, and response to growth factor signaling pathways were activated in MMPS-H group, patients with the high MMPS risk score and low M2 macrophage showed the worst recurrence-free survival (RFS). Conclusion: MMPs involved and played an essential role in the tumorigenesis and biochemical recurrence in PCa patients. The MMPS signature could accurately predict the recurrence of PCa patients and validated in several cohorts.
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spelling pubmed-73593992020-07-14 The prognostic value and potential mechanism of Matrix Metalloproteinases among Prostate Cancer Geng, Xinyu Chen, Chunyang Huang, Yuhua Hou, Jianquan Int J Med Sci Research Paper Background: Matrix Metalloproteinases (MMPs) play an indispensable role in the initial alteration and development of PCa. We tried to generate an MMP-related prognostic signature (MMPS) in prostate cancer (PCa). Methods: TCGA-PRAD, MSKCC/GSE21032, GSE116918, GSE70769 cohorts were enrolled to assess the prognostic value of MMPs. The least absolute shrinkage and selection operator (LASSO) Cox regression was employed to generate the MMPS signature. The log-rank test and Kaplan-Meier (K-M) survival curve were applied to show the difference RFS, The receiver operating characteristic (ROC) curve and area under the ROC curve (AUC) was plotted to predict the accuracy of signature. CIBERSORT was conducted to analyze the different immune infiltration in MMPS-H and MMPS-L groups. Potential signaling pathways activated in the MMPS-H groups by Metascape. Results: MMP1, MMP7, MMP11, MMP24 and MMP26 were selected by LASSO regression and established the MMPS predict signature. The MMPS showed the high prognostic value in TCGA-PRAD training cohort (AUC=0.714) and validation cohorts (GSE116918: AUC=0.976, GSE70769: AUC=0.738, MSKCC: AUC=0.793). Pid integrin1 pathway, G2M checkpoint, and response to growth factor signaling pathways were activated in MMPS-H group, patients with the high MMPS risk score and low M2 macrophage showed the worst recurrence-free survival (RFS). Conclusion: MMPs involved and played an essential role in the tumorigenesis and biochemical recurrence in PCa patients. The MMPS signature could accurately predict the recurrence of PCa patients and validated in several cohorts. Ivyspring International Publisher 2020-06-21 /pmc/articles/PMC7359399/ /pubmed/32669958 http://dx.doi.org/10.7150/ijms.46780 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Geng, Xinyu
Chen, Chunyang
Huang, Yuhua
Hou, Jianquan
The prognostic value and potential mechanism of Matrix Metalloproteinases among Prostate Cancer
title The prognostic value and potential mechanism of Matrix Metalloproteinases among Prostate Cancer
title_full The prognostic value and potential mechanism of Matrix Metalloproteinases among Prostate Cancer
title_fullStr The prognostic value and potential mechanism of Matrix Metalloproteinases among Prostate Cancer
title_full_unstemmed The prognostic value and potential mechanism of Matrix Metalloproteinases among Prostate Cancer
title_short The prognostic value and potential mechanism of Matrix Metalloproteinases among Prostate Cancer
title_sort prognostic value and potential mechanism of matrix metalloproteinases among prostate cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7359399/
https://www.ncbi.nlm.nih.gov/pubmed/32669958
http://dx.doi.org/10.7150/ijms.46780
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