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Rice Biofortification With Zinc and Selenium: A Transcriptomic Approach to Understand Mineral Accumulation in Flag Leaves

Human malnutrition due to micronutrient deficiencies, particularly with regards to Zinc (Zn) and Selenium (Se), affects millions of people around the world, and the enrichment of staple foods through biofortification has been successfully used to fight hidden hunger. Rice (Oryza sativa L.) is one of...

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Autores principales: Roda, Faustino Adriano, Marques, Isabel, Batista-Santos, Paula, Esquível, Maria Glória, Ndayiragije, Alexis, Lidon, Fernando Cebola, Swamy, B. P. Mallikarjuna, Ramalho, José Cochicho, Ribeiro-Barros, Ana I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7359728/
https://www.ncbi.nlm.nih.gov/pubmed/32733530
http://dx.doi.org/10.3389/fgene.2020.00543
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author Roda, Faustino Adriano
Marques, Isabel
Batista-Santos, Paula
Esquível, Maria Glória
Ndayiragije, Alexis
Lidon, Fernando Cebola
Swamy, B. P. Mallikarjuna
Ramalho, José Cochicho
Ribeiro-Barros, Ana I.
author_facet Roda, Faustino Adriano
Marques, Isabel
Batista-Santos, Paula
Esquível, Maria Glória
Ndayiragije, Alexis
Lidon, Fernando Cebola
Swamy, B. P. Mallikarjuna
Ramalho, José Cochicho
Ribeiro-Barros, Ana I.
author_sort Roda, Faustino Adriano
collection PubMed
description Human malnutrition due to micronutrient deficiencies, particularly with regards to Zinc (Zn) and Selenium (Se), affects millions of people around the world, and the enrichment of staple foods through biofortification has been successfully used to fight hidden hunger. Rice (Oryza sativa L.) is one of the staple foods most consumed in countries with high levels of malnutrition. However, it is poor in micronutrients, which are often removed during grain processing. In this study, we have analyzed the transcriptome of rice flag leaves biofortified with Zn (900 g ha(–1)), Se (500 g ha(–1)), and Zn-Se. Flag leaves play an important role in plant photosynthesis and provide sources of metal remobilization for developing grains. A total of 3170 differentially expressed genes (DEGs) were identified. The expression patterns and gene ontology of DEGs varied among the three sets of biofortified plants and were limited to specific metabolic pathways related to micronutrient mobilization and to the specific functions of Zn (i.e., its enzymatic co-factor/coenzyme function in the biosynthesis of nitrogenous compounds, carboxylic acids, organic acids, and amino acids) and Se (vitamin biosynthesis and ion homeostasis). The success of this approach should be followed in future studies to understand how landraces and other cultivars respond to biofortification.
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spelling pubmed-73597282020-07-29 Rice Biofortification With Zinc and Selenium: A Transcriptomic Approach to Understand Mineral Accumulation in Flag Leaves Roda, Faustino Adriano Marques, Isabel Batista-Santos, Paula Esquível, Maria Glória Ndayiragije, Alexis Lidon, Fernando Cebola Swamy, B. P. Mallikarjuna Ramalho, José Cochicho Ribeiro-Barros, Ana I. Front Genet Genetics Human malnutrition due to micronutrient deficiencies, particularly with regards to Zinc (Zn) and Selenium (Se), affects millions of people around the world, and the enrichment of staple foods through biofortification has been successfully used to fight hidden hunger. Rice (Oryza sativa L.) is one of the staple foods most consumed in countries with high levels of malnutrition. However, it is poor in micronutrients, which are often removed during grain processing. In this study, we have analyzed the transcriptome of rice flag leaves biofortified with Zn (900 g ha(–1)), Se (500 g ha(–1)), and Zn-Se. Flag leaves play an important role in plant photosynthesis and provide sources of metal remobilization for developing grains. A total of 3170 differentially expressed genes (DEGs) were identified. The expression patterns and gene ontology of DEGs varied among the three sets of biofortified plants and were limited to specific metabolic pathways related to micronutrient mobilization and to the specific functions of Zn (i.e., its enzymatic co-factor/coenzyme function in the biosynthesis of nitrogenous compounds, carboxylic acids, organic acids, and amino acids) and Se (vitamin biosynthesis and ion homeostasis). The success of this approach should be followed in future studies to understand how landraces and other cultivars respond to biofortification. Frontiers Media S.A. 2020-07-07 /pmc/articles/PMC7359728/ /pubmed/32733530 http://dx.doi.org/10.3389/fgene.2020.00543 Text en Copyright © 2020 Roda, Marques, Batista-Santos, Esquível, Ndayiragije, Lidon, Swamy, Ramalho and Ribeiro-Barros. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Roda, Faustino Adriano
Marques, Isabel
Batista-Santos, Paula
Esquível, Maria Glória
Ndayiragije, Alexis
Lidon, Fernando Cebola
Swamy, B. P. Mallikarjuna
Ramalho, José Cochicho
Ribeiro-Barros, Ana I.
Rice Biofortification With Zinc and Selenium: A Transcriptomic Approach to Understand Mineral Accumulation in Flag Leaves
title Rice Biofortification With Zinc and Selenium: A Transcriptomic Approach to Understand Mineral Accumulation in Flag Leaves
title_full Rice Biofortification With Zinc and Selenium: A Transcriptomic Approach to Understand Mineral Accumulation in Flag Leaves
title_fullStr Rice Biofortification With Zinc and Selenium: A Transcriptomic Approach to Understand Mineral Accumulation in Flag Leaves
title_full_unstemmed Rice Biofortification With Zinc and Selenium: A Transcriptomic Approach to Understand Mineral Accumulation in Flag Leaves
title_short Rice Biofortification With Zinc and Selenium: A Transcriptomic Approach to Understand Mineral Accumulation in Flag Leaves
title_sort rice biofortification with zinc and selenium: a transcriptomic approach to understand mineral accumulation in flag leaves
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7359728/
https://www.ncbi.nlm.nih.gov/pubmed/32733530
http://dx.doi.org/10.3389/fgene.2020.00543
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