Cargando…

Simulating the spread of COVID-19 via a spatially-resolved susceptible–exposed–infected–recovered–deceased (SEIRD) model with heterogeneous diffusion

We present an early version of a Susceptible–Exposed–Infected–Recovered–Deceased (SEIRD) mathematical model based on partial differential equations coupled with a heterogeneous diffusion model. The model describes the spatio-temporal spread of the COVID-19 pandemic, and aims to capture dynamics also...

Descripción completa

Detalles Bibliográficos
Autores principales: Viguerie, Alex, Lorenzo, Guillermo, Auricchio, Ferdinando, Baroli, Davide, Hughes, Thomas J.R., Patton, Alessia, Reali, Alessandro, Yankeelov, Thomas E., Veneziani, Alessandro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7361091/
https://www.ncbi.nlm.nih.gov/pubmed/32834475
http://dx.doi.org/10.1016/j.aml.2020.106617
_version_ 1783559340875055104
author Viguerie, Alex
Lorenzo, Guillermo
Auricchio, Ferdinando
Baroli, Davide
Hughes, Thomas J.R.
Patton, Alessia
Reali, Alessandro
Yankeelov, Thomas E.
Veneziani, Alessandro
author_facet Viguerie, Alex
Lorenzo, Guillermo
Auricchio, Ferdinando
Baroli, Davide
Hughes, Thomas J.R.
Patton, Alessia
Reali, Alessandro
Yankeelov, Thomas E.
Veneziani, Alessandro
author_sort Viguerie, Alex
collection PubMed
description We present an early version of a Susceptible–Exposed–Infected–Recovered–Deceased (SEIRD) mathematical model based on partial differential equations coupled with a heterogeneous diffusion model. The model describes the spatio-temporal spread of the COVID-19 pandemic, and aims to capture dynamics also based on human habits and geographical features. To test the model, we compare the outputs generated by a finite-element solver with measured data over the Italian region of Lombardy, which has been heavily impacted by this crisis between February and April 2020. Our results show a strong qualitative agreement between the simulated forecast of the spatio-temporal COVID-19 spread in Lombardy and epidemiological data collected at the municipality level. Additional simulations exploring alternative scenarios for the relaxation of lockdown restrictions suggest that reopening strategies should account for local population densities and the specific dynamics of the contagion. Thus, we argue that data-driven simulations of our model could ultimately inform health authorities to design effective pandemic-arresting measures and anticipate the geographical allocation of crucial medical resources.
format Online
Article
Text
id pubmed-7361091
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Elsevier Ltd.
record_format MEDLINE/PubMed
spelling pubmed-73610912020-07-15 Simulating the spread of COVID-19 via a spatially-resolved susceptible–exposed–infected–recovered–deceased (SEIRD) model with heterogeneous diffusion Viguerie, Alex Lorenzo, Guillermo Auricchio, Ferdinando Baroli, Davide Hughes, Thomas J.R. Patton, Alessia Reali, Alessandro Yankeelov, Thomas E. Veneziani, Alessandro Appl Math Lett Article We present an early version of a Susceptible–Exposed–Infected–Recovered–Deceased (SEIRD) mathematical model based on partial differential equations coupled with a heterogeneous diffusion model. The model describes the spatio-temporal spread of the COVID-19 pandemic, and aims to capture dynamics also based on human habits and geographical features. To test the model, we compare the outputs generated by a finite-element solver with measured data over the Italian region of Lombardy, which has been heavily impacted by this crisis between February and April 2020. Our results show a strong qualitative agreement between the simulated forecast of the spatio-temporal COVID-19 spread in Lombardy and epidemiological data collected at the municipality level. Additional simulations exploring alternative scenarios for the relaxation of lockdown restrictions suggest that reopening strategies should account for local population densities and the specific dynamics of the contagion. Thus, we argue that data-driven simulations of our model could ultimately inform health authorities to design effective pandemic-arresting measures and anticipate the geographical allocation of crucial medical resources. Elsevier Ltd. 2021-01 2020-07-15 /pmc/articles/PMC7361091/ /pubmed/32834475 http://dx.doi.org/10.1016/j.aml.2020.106617 Text en © 2020 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Viguerie, Alex
Lorenzo, Guillermo
Auricchio, Ferdinando
Baroli, Davide
Hughes, Thomas J.R.
Patton, Alessia
Reali, Alessandro
Yankeelov, Thomas E.
Veneziani, Alessandro
Simulating the spread of COVID-19 via a spatially-resolved susceptible–exposed–infected–recovered–deceased (SEIRD) model with heterogeneous diffusion
title Simulating the spread of COVID-19 via a spatially-resolved susceptible–exposed–infected–recovered–deceased (SEIRD) model with heterogeneous diffusion
title_full Simulating the spread of COVID-19 via a spatially-resolved susceptible–exposed–infected–recovered–deceased (SEIRD) model with heterogeneous diffusion
title_fullStr Simulating the spread of COVID-19 via a spatially-resolved susceptible–exposed–infected–recovered–deceased (SEIRD) model with heterogeneous diffusion
title_full_unstemmed Simulating the spread of COVID-19 via a spatially-resolved susceptible–exposed–infected–recovered–deceased (SEIRD) model with heterogeneous diffusion
title_short Simulating the spread of COVID-19 via a spatially-resolved susceptible–exposed–infected–recovered–deceased (SEIRD) model with heterogeneous diffusion
title_sort simulating the spread of covid-19 via a spatially-resolved susceptible–exposed–infected–recovered–deceased (seird) model with heterogeneous diffusion
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7361091/
https://www.ncbi.nlm.nih.gov/pubmed/32834475
http://dx.doi.org/10.1016/j.aml.2020.106617
work_keys_str_mv AT vigueriealex simulatingthespreadofcovid19viaaspatiallyresolvedsusceptibleexposedinfectedrecovereddeceasedseirdmodelwithheterogeneousdiffusion
AT lorenzoguillermo simulatingthespreadofcovid19viaaspatiallyresolvedsusceptibleexposedinfectedrecovereddeceasedseirdmodelwithheterogeneousdiffusion
AT auricchioferdinando simulatingthespreadofcovid19viaaspatiallyresolvedsusceptibleexposedinfectedrecovereddeceasedseirdmodelwithheterogeneousdiffusion
AT barolidavide simulatingthespreadofcovid19viaaspatiallyresolvedsusceptibleexposedinfectedrecovereddeceasedseirdmodelwithheterogeneousdiffusion
AT hughesthomasjr simulatingthespreadofcovid19viaaspatiallyresolvedsusceptibleexposedinfectedrecovereddeceasedseirdmodelwithheterogeneousdiffusion
AT pattonalessia simulatingthespreadofcovid19viaaspatiallyresolvedsusceptibleexposedinfectedrecovereddeceasedseirdmodelwithheterogeneousdiffusion
AT realialessandro simulatingthespreadofcovid19viaaspatiallyresolvedsusceptibleexposedinfectedrecovereddeceasedseirdmodelwithheterogeneousdiffusion
AT yankeelovthomase simulatingthespreadofcovid19viaaspatiallyresolvedsusceptibleexposedinfectedrecovereddeceasedseirdmodelwithheterogeneousdiffusion
AT venezianialessandro simulatingthespreadofcovid19viaaspatiallyresolvedsusceptibleexposedinfectedrecovereddeceasedseirdmodelwithheterogeneousdiffusion