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A SARS-CoV-2 vaccine candidate: In-silico cloning and validation

SARS-CoV-2 is spreading globally at a rapid pace. To contain its spread and prevent further fatalities, the development of a vaccine against SARS-CoV-2 is an urgent prerequisite. Thus, in this article, by utilizing the in-silico approach, a vaccine candidate for SARS-CoV-2 has been proposed. Moreove...

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Autores principales: Bhattacharya, Manojit, Sharma, Ashish Ranjan, Patra, Prasanta, Ghosh, Pratik, Sharma, Garima, Patra, Bidhan Chandra, Saha, Rudra P., Lee, Sang-Soo, Chakraborty, Chiranjib
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7361115/
https://www.ncbi.nlm.nih.gov/pubmed/32835079
http://dx.doi.org/10.1016/j.imu.2020.100394
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author Bhattacharya, Manojit
Sharma, Ashish Ranjan
Patra, Prasanta
Ghosh, Pratik
Sharma, Garima
Patra, Bidhan Chandra
Saha, Rudra P.
Lee, Sang-Soo
Chakraborty, Chiranjib
author_facet Bhattacharya, Manojit
Sharma, Ashish Ranjan
Patra, Prasanta
Ghosh, Pratik
Sharma, Garima
Patra, Bidhan Chandra
Saha, Rudra P.
Lee, Sang-Soo
Chakraborty, Chiranjib
author_sort Bhattacharya, Manojit
collection PubMed
description SARS-CoV-2 is spreading globally at a rapid pace. To contain its spread and prevent further fatalities, the development of a vaccine against SARS-CoV-2 is an urgent prerequisite. Thus, in this article, by utilizing the in-silico approach, a vaccine candidate for SARS-CoV-2 has been proposed. Moreover, the effectiveness and safety measures of our proposed epitopic vaccine candidate have been evaluated by in-silico tools and servers (AllerTOP and AllergenFP servers). We observed that the vaccine candidate has no allergenicity and successfully combined with Toll-like receptor (TLR) protein to elicit an inflammatory immune response. Stable, functional mobility of the vaccine-TLR protein binding interface was confirmed by the Normal Mode Analysis. The in-silico cloning model demonstrated the efficacy of the construct vaccine along with the identified epitopes against SARS-CoV-2. Taken together, our proposed in-silico vaccine candidate has potent efficacy against COVID-19 infection, and successive research work might validate its effectiveness in in vitro and in vivo models.
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spelling pubmed-73611152020-07-15 A SARS-CoV-2 vaccine candidate: In-silico cloning and validation Bhattacharya, Manojit Sharma, Ashish Ranjan Patra, Prasanta Ghosh, Pratik Sharma, Garima Patra, Bidhan Chandra Saha, Rudra P. Lee, Sang-Soo Chakraborty, Chiranjib Inform Med Unlocked Article SARS-CoV-2 is spreading globally at a rapid pace. To contain its spread and prevent further fatalities, the development of a vaccine against SARS-CoV-2 is an urgent prerequisite. Thus, in this article, by utilizing the in-silico approach, a vaccine candidate for SARS-CoV-2 has been proposed. Moreover, the effectiveness and safety measures of our proposed epitopic vaccine candidate have been evaluated by in-silico tools and servers (AllerTOP and AllergenFP servers). We observed that the vaccine candidate has no allergenicity and successfully combined with Toll-like receptor (TLR) protein to elicit an inflammatory immune response. Stable, functional mobility of the vaccine-TLR protein binding interface was confirmed by the Normal Mode Analysis. The in-silico cloning model demonstrated the efficacy of the construct vaccine along with the identified epitopes against SARS-CoV-2. Taken together, our proposed in-silico vaccine candidate has potent efficacy against COVID-19 infection, and successive research work might validate its effectiveness in in vitro and in vivo models. The Authors. Published by Elsevier Ltd. 2020 2020-07-15 /pmc/articles/PMC7361115/ /pubmed/32835079 http://dx.doi.org/10.1016/j.imu.2020.100394 Text en © 2020 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Bhattacharya, Manojit
Sharma, Ashish Ranjan
Patra, Prasanta
Ghosh, Pratik
Sharma, Garima
Patra, Bidhan Chandra
Saha, Rudra P.
Lee, Sang-Soo
Chakraborty, Chiranjib
A SARS-CoV-2 vaccine candidate: In-silico cloning and validation
title A SARS-CoV-2 vaccine candidate: In-silico cloning and validation
title_full A SARS-CoV-2 vaccine candidate: In-silico cloning and validation
title_fullStr A SARS-CoV-2 vaccine candidate: In-silico cloning and validation
title_full_unstemmed A SARS-CoV-2 vaccine candidate: In-silico cloning and validation
title_short A SARS-CoV-2 vaccine candidate: In-silico cloning and validation
title_sort sars-cov-2 vaccine candidate: in-silico cloning and validation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7361115/
https://www.ncbi.nlm.nih.gov/pubmed/32835079
http://dx.doi.org/10.1016/j.imu.2020.100394
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