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Ontological model of multi-agent Smart-system for predicting drug properties based on modified algorithms of artificial immune systems
BACKGROUND: Currently, due to the huge progress in the field of information technologies and computer equipment, it is important to use modern approaches of artificial intelligence in order to process extensive chemical information at creating new drugs with desired properties. The interdisciplinary...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7362494/ https://www.ncbi.nlm.nih.gov/pubmed/32669115 http://dx.doi.org/10.1186/s12976-020-00130-x |
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author | Samigulina, Galina Samigulina, Zarina |
author_facet | Samigulina, Galina Samigulina, Zarina |
author_sort | Samigulina, Galina |
collection | PubMed |
description | BACKGROUND: Currently, due to the huge progress in the field of information technologies and computer equipment, it is important to use modern approaches of artificial intelligence in order to process extensive chemical information at creating new drugs with desired properties. The interdisciplinary of research creates additional difficulties in creating new drugs. Currently, there are no universal algorithms and software for predicting the “structure-property” dependence of drug compounds that can take into account the needs of specialists in this field. In this regard, the development of a modern Smart-system based on the promising bio-inspired approach of artificial immune systems for predicting the structure-property dependence of drug compounds is relevant. The aim of this work is to develop a multi-agent Smart-system for predicting the “structure-property” dependence of drug compounds using the ontological approach and modified algorithms of artificial immune systems using the example of drug compounds of the sulfonamide group. The proposed system makes it possible to increase the accuracy of prediction models of the “structure-property” dependence, to reduce the time and financial costs for obtaining candidate drug compounds. METHODS: During the creation of a Smart-system, there are used multi-agent and ontological approaches, which allow to structure input and output data, optimally to distribute computing resources and to coordinate the work of the system. As a promising approach for processing a large amount of chemical information, extracting informative descriptors and for the creation of an optimal data set, as well as further predicting the properties of medicinal compounds, there are considered modified algorithms of artificial immune systems and various algorithms of artificial intelligence. RESULTS: There was developed an ontological model of a multi-agent Smart-system. There are presented the results of the «structure-property» dependence simulation based on a modified grey wolf optimization algorithm and artificial immune systems. During the simulation, there was used information from the Mol-Instincts sulfonamide descriptor database. CONCLUSION: The developed multi-agent Smart-system using ontological models allows visually to present the structure and interrelationships of agents functioning, which greatly facilitates the development of software and reduces time and financial costs during the development of new drugs. |
format | Online Article Text |
id | pubmed-7362494 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-73624942020-07-20 Ontological model of multi-agent Smart-system for predicting drug properties based on modified algorithms of artificial immune systems Samigulina, Galina Samigulina, Zarina Theor Biol Med Model Research BACKGROUND: Currently, due to the huge progress in the field of information technologies and computer equipment, it is important to use modern approaches of artificial intelligence in order to process extensive chemical information at creating new drugs with desired properties. The interdisciplinary of research creates additional difficulties in creating new drugs. Currently, there are no universal algorithms and software for predicting the “structure-property” dependence of drug compounds that can take into account the needs of specialists in this field. In this regard, the development of a modern Smart-system based on the promising bio-inspired approach of artificial immune systems for predicting the structure-property dependence of drug compounds is relevant. The aim of this work is to develop a multi-agent Smart-system for predicting the “structure-property” dependence of drug compounds using the ontological approach and modified algorithms of artificial immune systems using the example of drug compounds of the sulfonamide group. The proposed system makes it possible to increase the accuracy of prediction models of the “structure-property” dependence, to reduce the time and financial costs for obtaining candidate drug compounds. METHODS: During the creation of a Smart-system, there are used multi-agent and ontological approaches, which allow to structure input and output data, optimally to distribute computing resources and to coordinate the work of the system. As a promising approach for processing a large amount of chemical information, extracting informative descriptors and for the creation of an optimal data set, as well as further predicting the properties of medicinal compounds, there are considered modified algorithms of artificial immune systems and various algorithms of artificial intelligence. RESULTS: There was developed an ontological model of a multi-agent Smart-system. There are presented the results of the «structure-property» dependence simulation based on a modified grey wolf optimization algorithm and artificial immune systems. During the simulation, there was used information from the Mol-Instincts sulfonamide descriptor database. CONCLUSION: The developed multi-agent Smart-system using ontological models allows visually to present the structure and interrelationships of agents functioning, which greatly facilitates the development of software and reduces time and financial costs during the development of new drugs. BioMed Central 2020-07-20 /pmc/articles/PMC7362494/ /pubmed/32669115 http://dx.doi.org/10.1186/s12976-020-00130-x Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Samigulina, Galina Samigulina, Zarina Ontological model of multi-agent Smart-system for predicting drug properties based on modified algorithms of artificial immune systems |
title | Ontological model of multi-agent Smart-system for predicting drug properties based on modified algorithms of artificial immune systems |
title_full | Ontological model of multi-agent Smart-system for predicting drug properties based on modified algorithms of artificial immune systems |
title_fullStr | Ontological model of multi-agent Smart-system for predicting drug properties based on modified algorithms of artificial immune systems |
title_full_unstemmed | Ontological model of multi-agent Smart-system for predicting drug properties based on modified algorithms of artificial immune systems |
title_short | Ontological model of multi-agent Smart-system for predicting drug properties based on modified algorithms of artificial immune systems |
title_sort | ontological model of multi-agent smart-system for predicting drug properties based on modified algorithms of artificial immune systems |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7362494/ https://www.ncbi.nlm.nih.gov/pubmed/32669115 http://dx.doi.org/10.1186/s12976-020-00130-x |
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