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Point of Care Nucleic Acid Testing for SARS-CoV-2 in Hospitalized Patients: A Clinical Validation Trial and Implementation Study

There is an urgent need for rapid SARS-CoV-2 testing in hospitals to limit nosocomial spread. We report an evaluation of point of care (POC) nucleic acid amplification testing (NAAT) in 149 participants with parallel combined nasal and throat swabbing for POC versus standard lab RT-PCR testing. Medi...

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Autores principales: Collier, Dami A., Assennato, Sonny M., Warne, Ben, Sithole, Nyarie, Sharrocks, Katherine, Ritchie, Allyson, Ravji, Pooja, Routledge, Matthew, Sparkes, Dominic, Skittrall, Jordan, Smielewska, Anna, Ramsey, Isobel, Goel, Neha, Curran, Martin, Enoch, David, Tassell, Rhys, Lineham, Michelle, Vaghela, Devan, Leong, Clare, Mok, Hoi Ping, Bradley, John, Smith, Kenneth G.C., Mendoza, Vivienne, Demiris, Nikos, Besser, Martin, Dougan, Gordon, Lehner, Paul J., Siedner, Mark J., Zhang, Hongyi, Waddington, Claire S., Lee, Helen, Gupta, Ravindra K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7362826/
https://www.ncbi.nlm.nih.gov/pubmed/32838340
http://dx.doi.org/10.1016/j.xcrm.2020.100062
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author Collier, Dami A.
Assennato, Sonny M.
Warne, Ben
Sithole, Nyarie
Sharrocks, Katherine
Ritchie, Allyson
Ravji, Pooja
Routledge, Matthew
Sparkes, Dominic
Skittrall, Jordan
Smielewska, Anna
Ramsey, Isobel
Goel, Neha
Curran, Martin
Enoch, David
Tassell, Rhys
Lineham, Michelle
Vaghela, Devan
Leong, Clare
Mok, Hoi Ping
Bradley, John
Smith, Kenneth G.C.
Mendoza, Vivienne
Demiris, Nikos
Besser, Martin
Dougan, Gordon
Lehner, Paul J.
Siedner, Mark J.
Zhang, Hongyi
Waddington, Claire S.
Lee, Helen
Gupta, Ravindra K.
author_facet Collier, Dami A.
Assennato, Sonny M.
Warne, Ben
Sithole, Nyarie
Sharrocks, Katherine
Ritchie, Allyson
Ravji, Pooja
Routledge, Matthew
Sparkes, Dominic
Skittrall, Jordan
Smielewska, Anna
Ramsey, Isobel
Goel, Neha
Curran, Martin
Enoch, David
Tassell, Rhys
Lineham, Michelle
Vaghela, Devan
Leong, Clare
Mok, Hoi Ping
Bradley, John
Smith, Kenneth G.C.
Mendoza, Vivienne
Demiris, Nikos
Besser, Martin
Dougan, Gordon
Lehner, Paul J.
Siedner, Mark J.
Zhang, Hongyi
Waddington, Claire S.
Lee, Helen
Gupta, Ravindra K.
author_sort Collier, Dami A.
collection PubMed
description There is an urgent need for rapid SARS-CoV-2 testing in hospitals to limit nosocomial spread. We report an evaluation of point of care (POC) nucleic acid amplification testing (NAAT) in 149 participants with parallel combined nasal and throat swabbing for POC versus standard lab RT-PCR testing. Median time to result is 2.6 (IQR 2.3–4.8) versus 26.4 h (IQR 21.4–31.4, p < 0.001), with 32 (21.5%) positive and 117 (78.5%) negative. Cohen’s κ correlation between tests is 0.96 (95% CI 0.91–1.00). When comparing nearly 1,000 tests pre- and post-implementation, the median time to definitive bed placement from admission is 23.4 (8.6-41.9) versus 17.1 h (9.0–28.8), p = 0.02. Mean length of stay on COVID-19 “holding” wards is 58.5 versus 29.9 h (p < 0.001). POC testing increases isolation room availability, avoids bed closures, allows discharge to care homes, and expedites access to hospital procedures. POC testing could mitigate the impact of COVID-19 on hospital systems.
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spelling pubmed-73628262020-07-16 Point of Care Nucleic Acid Testing for SARS-CoV-2 in Hospitalized Patients: A Clinical Validation Trial and Implementation Study Collier, Dami A. Assennato, Sonny M. Warne, Ben Sithole, Nyarie Sharrocks, Katherine Ritchie, Allyson Ravji, Pooja Routledge, Matthew Sparkes, Dominic Skittrall, Jordan Smielewska, Anna Ramsey, Isobel Goel, Neha Curran, Martin Enoch, David Tassell, Rhys Lineham, Michelle Vaghela, Devan Leong, Clare Mok, Hoi Ping Bradley, John Smith, Kenneth G.C. Mendoza, Vivienne Demiris, Nikos Besser, Martin Dougan, Gordon Lehner, Paul J. Siedner, Mark J. Zhang, Hongyi Waddington, Claire S. Lee, Helen Gupta, Ravindra K. Cell Rep Med Article There is an urgent need for rapid SARS-CoV-2 testing in hospitals to limit nosocomial spread. We report an evaluation of point of care (POC) nucleic acid amplification testing (NAAT) in 149 participants with parallel combined nasal and throat swabbing for POC versus standard lab RT-PCR testing. Median time to result is 2.6 (IQR 2.3–4.8) versus 26.4 h (IQR 21.4–31.4, p < 0.001), with 32 (21.5%) positive and 117 (78.5%) negative. Cohen’s κ correlation between tests is 0.96 (95% CI 0.91–1.00). When comparing nearly 1,000 tests pre- and post-implementation, the median time to definitive bed placement from admission is 23.4 (8.6-41.9) versus 17.1 h (9.0–28.8), p = 0.02. Mean length of stay on COVID-19 “holding” wards is 58.5 versus 29.9 h (p < 0.001). POC testing increases isolation room availability, avoids bed closures, allows discharge to care homes, and expedites access to hospital procedures. POC testing could mitigate the impact of COVID-19 on hospital systems. Elsevier 2020-07-15 /pmc/articles/PMC7362826/ /pubmed/32838340 http://dx.doi.org/10.1016/j.xcrm.2020.100062 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Collier, Dami A.
Assennato, Sonny M.
Warne, Ben
Sithole, Nyarie
Sharrocks, Katherine
Ritchie, Allyson
Ravji, Pooja
Routledge, Matthew
Sparkes, Dominic
Skittrall, Jordan
Smielewska, Anna
Ramsey, Isobel
Goel, Neha
Curran, Martin
Enoch, David
Tassell, Rhys
Lineham, Michelle
Vaghela, Devan
Leong, Clare
Mok, Hoi Ping
Bradley, John
Smith, Kenneth G.C.
Mendoza, Vivienne
Demiris, Nikos
Besser, Martin
Dougan, Gordon
Lehner, Paul J.
Siedner, Mark J.
Zhang, Hongyi
Waddington, Claire S.
Lee, Helen
Gupta, Ravindra K.
Point of Care Nucleic Acid Testing for SARS-CoV-2 in Hospitalized Patients: A Clinical Validation Trial and Implementation Study
title Point of Care Nucleic Acid Testing for SARS-CoV-2 in Hospitalized Patients: A Clinical Validation Trial and Implementation Study
title_full Point of Care Nucleic Acid Testing for SARS-CoV-2 in Hospitalized Patients: A Clinical Validation Trial and Implementation Study
title_fullStr Point of Care Nucleic Acid Testing for SARS-CoV-2 in Hospitalized Patients: A Clinical Validation Trial and Implementation Study
title_full_unstemmed Point of Care Nucleic Acid Testing for SARS-CoV-2 in Hospitalized Patients: A Clinical Validation Trial and Implementation Study
title_short Point of Care Nucleic Acid Testing for SARS-CoV-2 in Hospitalized Patients: A Clinical Validation Trial and Implementation Study
title_sort point of care nucleic acid testing for sars-cov-2 in hospitalized patients: a clinical validation trial and implementation study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7362826/
https://www.ncbi.nlm.nih.gov/pubmed/32838340
http://dx.doi.org/10.1016/j.xcrm.2020.100062
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