Cargando…

Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation

Single mutations frequently alter several aspects of cell behavior but rarely reveal whether a particular statistically significant change is biologically significant. To determine which behavioral changes are most important for multicellular self-organization, we devised a new methodology using Myx...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Zhaoyang, Cotter, Christopher R., Lyu, Zhe, Shimkets, Lawrence J., Igoshin, Oleg A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7363006/
https://www.ncbi.nlm.nih.gov/pubmed/32665330
http://dx.doi.org/10.1128/mSystems.00518-20
_version_ 1783559594164879360
author Zhang, Zhaoyang
Cotter, Christopher R.
Lyu, Zhe
Shimkets, Lawrence J.
Igoshin, Oleg A.
author_facet Zhang, Zhaoyang
Cotter, Christopher R.
Lyu, Zhe
Shimkets, Lawrence J.
Igoshin, Oleg A.
author_sort Zhang, Zhaoyang
collection PubMed
description Single mutations frequently alter several aspects of cell behavior but rarely reveal whether a particular statistically significant change is biologically significant. To determine which behavioral changes are most important for multicellular self-organization, we devised a new methodology using Myxococcus xanthus as a model system. During development, myxobacteria coordinate their movement to aggregate into spore-filled fruiting bodies. We investigate how aggregation is restored in two mutants, csgA and pilC, that cannot aggregate unless mixed with wild-type (WT) cells. To this end, we use cell tracking to follow the movement of fluorescently labeled cells in combination with data-driven agent-based modeling. The results indicate that just like WT cells, both mutants bias their movement toward aggregates and reduce motility inside aggregates. However, several aspects of mutant behavior remain uncorrected by WT, demonstrating that perfect recreation of WT behavior is unnecessary. In fact, synergies between errant behaviors can make aggregation robust. IMPORTANCE Self-organization into spatial patterns is evident in many multicellular phenomena. Even for the best-studied systems, our ability to dissect the mechanisms driving coordinated cell movement is limited. While genetic approaches can identify mutations perturbing multicellular patterns, the diverse nature of the signaling cues coupled to significant heterogeneity of individual cell behavior impedes our ability to mechanistically connect genes with phenotype. Small differences in the behaviors of mutant strains could be irrelevant or could sometimes lead to large differences in the emergent patterns. Here, we investigate rescue of multicellular aggregation in two mutant strains of Myxococcus xanthus mixed with wild-type cells. The results demonstrate how careful quantification of cell behavior coupled to data-driven modeling can identify specific motility features responsible for cell aggregation and thereby reveal important synergies and compensatory mechanisms. Notably, mutant cells do not need to precisely recreate wild-type behaviors to achieve complete aggregation.
format Online
Article
Text
id pubmed-7363006
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-73630062020-07-16 Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation Zhang, Zhaoyang Cotter, Christopher R. Lyu, Zhe Shimkets, Lawrence J. Igoshin, Oleg A. mSystems Research Article Single mutations frequently alter several aspects of cell behavior but rarely reveal whether a particular statistically significant change is biologically significant. To determine which behavioral changes are most important for multicellular self-organization, we devised a new methodology using Myxococcus xanthus as a model system. During development, myxobacteria coordinate their movement to aggregate into spore-filled fruiting bodies. We investigate how aggregation is restored in two mutants, csgA and pilC, that cannot aggregate unless mixed with wild-type (WT) cells. To this end, we use cell tracking to follow the movement of fluorescently labeled cells in combination with data-driven agent-based modeling. The results indicate that just like WT cells, both mutants bias their movement toward aggregates and reduce motility inside aggregates. However, several aspects of mutant behavior remain uncorrected by WT, demonstrating that perfect recreation of WT behavior is unnecessary. In fact, synergies between errant behaviors can make aggregation robust. IMPORTANCE Self-organization into spatial patterns is evident in many multicellular phenomena. Even for the best-studied systems, our ability to dissect the mechanisms driving coordinated cell movement is limited. While genetic approaches can identify mutations perturbing multicellular patterns, the diverse nature of the signaling cues coupled to significant heterogeneity of individual cell behavior impedes our ability to mechanistically connect genes with phenotype. Small differences in the behaviors of mutant strains could be irrelevant or could sometimes lead to large differences in the emergent patterns. Here, we investigate rescue of multicellular aggregation in two mutant strains of Myxococcus xanthus mixed with wild-type cells. The results demonstrate how careful quantification of cell behavior coupled to data-driven modeling can identify specific motility features responsible for cell aggregation and thereby reveal important synergies and compensatory mechanisms. Notably, mutant cells do not need to precisely recreate wild-type behaviors to achieve complete aggregation. American Society for Microbiology 2020-07-14 /pmc/articles/PMC7363006/ /pubmed/32665330 http://dx.doi.org/10.1128/mSystems.00518-20 Text en Copyright © 2020 Zhang et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Article
Zhang, Zhaoyang
Cotter, Christopher R.
Lyu, Zhe
Shimkets, Lawrence J.
Igoshin, Oleg A.
Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation
title Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation
title_full Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation
title_fullStr Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation
title_full_unstemmed Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation
title_short Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation
title_sort data-driven models reveal mutant cell behaviors important for myxobacterial aggregation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7363006/
https://www.ncbi.nlm.nih.gov/pubmed/32665330
http://dx.doi.org/10.1128/mSystems.00518-20
work_keys_str_mv AT zhangzhaoyang datadrivenmodelsrevealmutantcellbehaviorsimportantformyxobacterialaggregation
AT cotterchristopherr datadrivenmodelsrevealmutantcellbehaviorsimportantformyxobacterialaggregation
AT lyuzhe datadrivenmodelsrevealmutantcellbehaviorsimportantformyxobacterialaggregation
AT shimketslawrencej datadrivenmodelsrevealmutantcellbehaviorsimportantformyxobacterialaggregation
AT igoshinolega datadrivenmodelsrevealmutantcellbehaviorsimportantformyxobacterialaggregation