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Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation
Single mutations frequently alter several aspects of cell behavior but rarely reveal whether a particular statistically significant change is biologically significant. To determine which behavioral changes are most important for multicellular self-organization, we devised a new methodology using Myx...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Microbiology
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7363006/ https://www.ncbi.nlm.nih.gov/pubmed/32665330 http://dx.doi.org/10.1128/mSystems.00518-20 |
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author | Zhang, Zhaoyang Cotter, Christopher R. Lyu, Zhe Shimkets, Lawrence J. Igoshin, Oleg A. |
author_facet | Zhang, Zhaoyang Cotter, Christopher R. Lyu, Zhe Shimkets, Lawrence J. Igoshin, Oleg A. |
author_sort | Zhang, Zhaoyang |
collection | PubMed |
description | Single mutations frequently alter several aspects of cell behavior but rarely reveal whether a particular statistically significant change is biologically significant. To determine which behavioral changes are most important for multicellular self-organization, we devised a new methodology using Myxococcus xanthus as a model system. During development, myxobacteria coordinate their movement to aggregate into spore-filled fruiting bodies. We investigate how aggregation is restored in two mutants, csgA and pilC, that cannot aggregate unless mixed with wild-type (WT) cells. To this end, we use cell tracking to follow the movement of fluorescently labeled cells in combination with data-driven agent-based modeling. The results indicate that just like WT cells, both mutants bias their movement toward aggregates and reduce motility inside aggregates. However, several aspects of mutant behavior remain uncorrected by WT, demonstrating that perfect recreation of WT behavior is unnecessary. In fact, synergies between errant behaviors can make aggregation robust. IMPORTANCE Self-organization into spatial patterns is evident in many multicellular phenomena. Even for the best-studied systems, our ability to dissect the mechanisms driving coordinated cell movement is limited. While genetic approaches can identify mutations perturbing multicellular patterns, the diverse nature of the signaling cues coupled to significant heterogeneity of individual cell behavior impedes our ability to mechanistically connect genes with phenotype. Small differences in the behaviors of mutant strains could be irrelevant or could sometimes lead to large differences in the emergent patterns. Here, we investigate rescue of multicellular aggregation in two mutant strains of Myxococcus xanthus mixed with wild-type cells. The results demonstrate how careful quantification of cell behavior coupled to data-driven modeling can identify specific motility features responsible for cell aggregation and thereby reveal important synergies and compensatory mechanisms. Notably, mutant cells do not need to precisely recreate wild-type behaviors to achieve complete aggregation. |
format | Online Article Text |
id | pubmed-7363006 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Society for Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-73630062020-07-16 Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation Zhang, Zhaoyang Cotter, Christopher R. Lyu, Zhe Shimkets, Lawrence J. Igoshin, Oleg A. mSystems Research Article Single mutations frequently alter several aspects of cell behavior but rarely reveal whether a particular statistically significant change is biologically significant. To determine which behavioral changes are most important for multicellular self-organization, we devised a new methodology using Myxococcus xanthus as a model system. During development, myxobacteria coordinate their movement to aggregate into spore-filled fruiting bodies. We investigate how aggregation is restored in two mutants, csgA and pilC, that cannot aggregate unless mixed with wild-type (WT) cells. To this end, we use cell tracking to follow the movement of fluorescently labeled cells in combination with data-driven agent-based modeling. The results indicate that just like WT cells, both mutants bias their movement toward aggregates and reduce motility inside aggregates. However, several aspects of mutant behavior remain uncorrected by WT, demonstrating that perfect recreation of WT behavior is unnecessary. In fact, synergies between errant behaviors can make aggregation robust. IMPORTANCE Self-organization into spatial patterns is evident in many multicellular phenomena. Even for the best-studied systems, our ability to dissect the mechanisms driving coordinated cell movement is limited. While genetic approaches can identify mutations perturbing multicellular patterns, the diverse nature of the signaling cues coupled to significant heterogeneity of individual cell behavior impedes our ability to mechanistically connect genes with phenotype. Small differences in the behaviors of mutant strains could be irrelevant or could sometimes lead to large differences in the emergent patterns. Here, we investigate rescue of multicellular aggregation in two mutant strains of Myxococcus xanthus mixed with wild-type cells. The results demonstrate how careful quantification of cell behavior coupled to data-driven modeling can identify specific motility features responsible for cell aggregation and thereby reveal important synergies and compensatory mechanisms. Notably, mutant cells do not need to precisely recreate wild-type behaviors to achieve complete aggregation. American Society for Microbiology 2020-07-14 /pmc/articles/PMC7363006/ /pubmed/32665330 http://dx.doi.org/10.1128/mSystems.00518-20 Text en Copyright © 2020 Zhang et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Article Zhang, Zhaoyang Cotter, Christopher R. Lyu, Zhe Shimkets, Lawrence J. Igoshin, Oleg A. Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation |
title | Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation |
title_full | Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation |
title_fullStr | Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation |
title_full_unstemmed | Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation |
title_short | Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation |
title_sort | data-driven models reveal mutant cell behaviors important for myxobacterial aggregation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7363006/ https://www.ncbi.nlm.nih.gov/pubmed/32665330 http://dx.doi.org/10.1128/mSystems.00518-20 |
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