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Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation

Salmonella enterica is an ubiquitous pathogen throughout the world causing gastroenteritis in humans and animals. Survival of pathogenic bacteria in the external environment may be associated with the ability to overcome the stress caused by starvation. The bacterial response to starvation is well u...

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Autores principales: Gogoleva, Natalia E., Kataev, Vladimir Ya., Balkin, Alexander S., Plotnikov, Andrey O., Shagimardanova, Elena I., Subbot, Anastasia M., Cherkasov, Sergey V., Gogolev, Yuri V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7364113/
https://www.ncbi.nlm.nih.gov/pubmed/32695865
http://dx.doi.org/10.1016/j.dib.2020.106008
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author Gogoleva, Natalia E.
Kataev, Vladimir Ya.
Balkin, Alexander S.
Plotnikov, Andrey O.
Shagimardanova, Elena I.
Subbot, Anastasia M.
Cherkasov, Sergey V.
Gogolev, Yuri V.
author_facet Gogoleva, Natalia E.
Kataev, Vladimir Ya.
Balkin, Alexander S.
Plotnikov, Andrey O.
Shagimardanova, Elena I.
Subbot, Anastasia M.
Cherkasov, Sergey V.
Gogolev, Yuri V.
author_sort Gogoleva, Natalia E.
collection PubMed
description Salmonella enterica is an ubiquitous pathogen throughout the world causing gastroenteritis in humans and animals. Survival of pathogenic bacteria in the external environment may be associated with the ability to overcome the stress caused by starvation. The bacterial response to starvation is well understood in laboratory cultures with a sufficiently high cell density. However, bacterial populations often have a small size when facing this challenge in natural biotopes. The aim of this work was to find out if there are differences in the transcriptomes of S. enterica depending on the factor of cell density during starvation. Here we present transcriptome data of Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S grown in carbon rich or carbon deficient medium with high or low cell density. These data will help identify genes involved in adaptation of low-density bacterial populations to starvation conditions.
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spelling pubmed-73641132020-07-20 Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation Gogoleva, Natalia E. Kataev, Vladimir Ya. Balkin, Alexander S. Plotnikov, Andrey O. Shagimardanova, Elena I. Subbot, Anastasia M. Cherkasov, Sergey V. Gogolev, Yuri V. Data Brief Biochemistry, Genetics and Molecular Biology Salmonella enterica is an ubiquitous pathogen throughout the world causing gastroenteritis in humans and animals. Survival of pathogenic bacteria in the external environment may be associated with the ability to overcome the stress caused by starvation. The bacterial response to starvation is well understood in laboratory cultures with a sufficiently high cell density. However, bacterial populations often have a small size when facing this challenge in natural biotopes. The aim of this work was to find out if there are differences in the transcriptomes of S. enterica depending on the factor of cell density during starvation. Here we present transcriptome data of Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S grown in carbon rich or carbon deficient medium with high or low cell density. These data will help identify genes involved in adaptation of low-density bacterial populations to starvation conditions. Elsevier 2020-07-07 /pmc/articles/PMC7364113/ /pubmed/32695865 http://dx.doi.org/10.1016/j.dib.2020.106008 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Biochemistry, Genetics and Molecular Biology
Gogoleva, Natalia E.
Kataev, Vladimir Ya.
Balkin, Alexander S.
Plotnikov, Andrey O.
Shagimardanova, Elena I.
Subbot, Anastasia M.
Cherkasov, Sergey V.
Gogolev, Yuri V.
Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation
title Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation
title_full Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation
title_fullStr Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation
title_full_unstemmed Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation
title_short Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation
title_sort dataset for transcriptome analysis of salmonella enterica subsp. enterica serovar typhimurium strain 14028s response to starvation
topic Biochemistry, Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7364113/
https://www.ncbi.nlm.nih.gov/pubmed/32695865
http://dx.doi.org/10.1016/j.dib.2020.106008
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