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Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation
Salmonella enterica is an ubiquitous pathogen throughout the world causing gastroenteritis in humans and animals. Survival of pathogenic bacteria in the external environment may be associated with the ability to overcome the stress caused by starvation. The bacterial response to starvation is well u...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7364113/ https://www.ncbi.nlm.nih.gov/pubmed/32695865 http://dx.doi.org/10.1016/j.dib.2020.106008 |
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author | Gogoleva, Natalia E. Kataev, Vladimir Ya. Balkin, Alexander S. Plotnikov, Andrey O. Shagimardanova, Elena I. Subbot, Anastasia M. Cherkasov, Sergey V. Gogolev, Yuri V. |
author_facet | Gogoleva, Natalia E. Kataev, Vladimir Ya. Balkin, Alexander S. Plotnikov, Andrey O. Shagimardanova, Elena I. Subbot, Anastasia M. Cherkasov, Sergey V. Gogolev, Yuri V. |
author_sort | Gogoleva, Natalia E. |
collection | PubMed |
description | Salmonella enterica is an ubiquitous pathogen throughout the world causing gastroenteritis in humans and animals. Survival of pathogenic bacteria in the external environment may be associated with the ability to overcome the stress caused by starvation. The bacterial response to starvation is well understood in laboratory cultures with a sufficiently high cell density. However, bacterial populations often have a small size when facing this challenge in natural biotopes. The aim of this work was to find out if there are differences in the transcriptomes of S. enterica depending on the factor of cell density during starvation. Here we present transcriptome data of Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S grown in carbon rich or carbon deficient medium with high or low cell density. These data will help identify genes involved in adaptation of low-density bacterial populations to starvation conditions. |
format | Online Article Text |
id | pubmed-7364113 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-73641132020-07-20 Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation Gogoleva, Natalia E. Kataev, Vladimir Ya. Balkin, Alexander S. Plotnikov, Andrey O. Shagimardanova, Elena I. Subbot, Anastasia M. Cherkasov, Sergey V. Gogolev, Yuri V. Data Brief Biochemistry, Genetics and Molecular Biology Salmonella enterica is an ubiquitous pathogen throughout the world causing gastroenteritis in humans and animals. Survival of pathogenic bacteria in the external environment may be associated with the ability to overcome the stress caused by starvation. The bacterial response to starvation is well understood in laboratory cultures with a sufficiently high cell density. However, bacterial populations often have a small size when facing this challenge in natural biotopes. The aim of this work was to find out if there are differences in the transcriptomes of S. enterica depending on the factor of cell density during starvation. Here we present transcriptome data of Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S grown in carbon rich or carbon deficient medium with high or low cell density. These data will help identify genes involved in adaptation of low-density bacterial populations to starvation conditions. Elsevier 2020-07-07 /pmc/articles/PMC7364113/ /pubmed/32695865 http://dx.doi.org/10.1016/j.dib.2020.106008 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Biochemistry, Genetics and Molecular Biology Gogoleva, Natalia E. Kataev, Vladimir Ya. Balkin, Alexander S. Plotnikov, Andrey O. Shagimardanova, Elena I. Subbot, Anastasia M. Cherkasov, Sergey V. Gogolev, Yuri V. Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation |
title | Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation |
title_full | Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation |
title_fullStr | Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation |
title_full_unstemmed | Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation |
title_short | Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation |
title_sort | dataset for transcriptome analysis of salmonella enterica subsp. enterica serovar typhimurium strain 14028s response to starvation |
topic | Biochemistry, Genetics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7364113/ https://www.ncbi.nlm.nih.gov/pubmed/32695865 http://dx.doi.org/10.1016/j.dib.2020.106008 |
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