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Multivariate genomic scan implicates novel loci and haem metabolism in human ageing
Ageing phenotypes, such as years lived in good health (healthspan), total years lived (lifespan), and survival until an exceptional old age (longevity), are of interest to us all but require exceptionally large sample sizes to study genetically. Here we combine existing genome-wide association summa...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7366647/ https://www.ncbi.nlm.nih.gov/pubmed/32678081 http://dx.doi.org/10.1038/s41467-020-17312-3 |
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author | Timmers, Paul R. H. J. Wilson, James F. Joshi, Peter K. Deelen, Joris |
author_facet | Timmers, Paul R. H. J. Wilson, James F. Joshi, Peter K. Deelen, Joris |
author_sort | Timmers, Paul R. H. J. |
collection | PubMed |
description | Ageing phenotypes, such as years lived in good health (healthspan), total years lived (lifespan), and survival until an exceptional old age (longevity), are of interest to us all but require exceptionally large sample sizes to study genetically. Here we combine existing genome-wide association summary statistics for healthspan, parental lifespan, and longevity in a multivariate framework, increasing statistical power, and identify 10 genomic loci which influence all three phenotypes, of which five (near FOXO3, SLC4A7, LINC02513, ZW10, and FGD6) have not been reported previously at genome-wide significance. The majority of these 10 loci are associated with cardiovascular disease and some affect the expression of genes known to change their activity with age. In total, we implicate 78 genes, and find these to be enriched for ageing pathways previously highlighted in model organisms, such as the response to DNA damage, apoptosis, and homeostasis. Finally, we identify a pathway worthy of further study: haem metabolism. |
format | Online Article Text |
id | pubmed-7366647 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-73666472020-07-21 Multivariate genomic scan implicates novel loci and haem metabolism in human ageing Timmers, Paul R. H. J. Wilson, James F. Joshi, Peter K. Deelen, Joris Nat Commun Article Ageing phenotypes, such as years lived in good health (healthspan), total years lived (lifespan), and survival until an exceptional old age (longevity), are of interest to us all but require exceptionally large sample sizes to study genetically. Here we combine existing genome-wide association summary statistics for healthspan, parental lifespan, and longevity in a multivariate framework, increasing statistical power, and identify 10 genomic loci which influence all three phenotypes, of which five (near FOXO3, SLC4A7, LINC02513, ZW10, and FGD6) have not been reported previously at genome-wide significance. The majority of these 10 loci are associated with cardiovascular disease and some affect the expression of genes known to change their activity with age. In total, we implicate 78 genes, and find these to be enriched for ageing pathways previously highlighted in model organisms, such as the response to DNA damage, apoptosis, and homeostasis. Finally, we identify a pathway worthy of further study: haem metabolism. Nature Publishing Group UK 2020-07-16 /pmc/articles/PMC7366647/ /pubmed/32678081 http://dx.doi.org/10.1038/s41467-020-17312-3 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Timmers, Paul R. H. J. Wilson, James F. Joshi, Peter K. Deelen, Joris Multivariate genomic scan implicates novel loci and haem metabolism in human ageing |
title | Multivariate genomic scan implicates novel loci and haem metabolism in human ageing |
title_full | Multivariate genomic scan implicates novel loci and haem metabolism in human ageing |
title_fullStr | Multivariate genomic scan implicates novel loci and haem metabolism in human ageing |
title_full_unstemmed | Multivariate genomic scan implicates novel loci and haem metabolism in human ageing |
title_short | Multivariate genomic scan implicates novel loci and haem metabolism in human ageing |
title_sort | multivariate genomic scan implicates novel loci and haem metabolism in human ageing |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7366647/ https://www.ncbi.nlm.nih.gov/pubmed/32678081 http://dx.doi.org/10.1038/s41467-020-17312-3 |
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