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Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania
Morphological and molecular analyses of plant-parasitic nematodes (PPN) from 12 sugarcane plantation sites of Tanganyika Planting Company (TPC) Limited in Kilimanjaro region of Tanzania revealed the presence of six PPN genera, i.e. Helicotylenchus, Hemicycliophora, Pratylenchus, Rotylenchulus, Scute...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Exeley Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7366841/ https://www.ncbi.nlm.nih.gov/pubmed/32628825 http://dx.doi.org/10.21307/jofnem-2020-059 |
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author | Singh, Phougeishangbam Rolish Kashando, Beatrice E. Couvreur, Marjolein Karssen, Gerrit Bert, Wim |
author_facet | Singh, Phougeishangbam Rolish Kashando, Beatrice E. Couvreur, Marjolein Karssen, Gerrit Bert, Wim |
author_sort | Singh, Phougeishangbam Rolish |
collection | PubMed |
description | Morphological and molecular analyses of plant-parasitic nematodes (PPN) from 12 sugarcane plantation sites of Tanganyika Planting Company (TPC) Limited in Kilimanjaro region of Tanzania revealed the presence of six PPN genera, i.e. Helicotylenchus, Hemicycliophora, Pratylenchus, Rotylenchulus, Scutellonema, and Tylenchorhynchus. The genera with the highest densities and present in virtually all samples were Pratylenchus and Rotylenchulus, and the most important species appeared to be R. parvus, P. zeae, T. crassicaudatus, and T. ventrosignatus. A total sequences of 11 partial ITS, 15 D2-D3 of 28S, and 6 partial 18S of rRNA gene, and 7 partial COI gene of mtDNA of these species were obtained in this study. Morphology and molecular data comparisons between the Tanzanian R. parvus and the South African R. parvus indicated that R. parvus is a cryptic species complex. Based on the results of morphological and molecular analyses of T. crassicaudatus and T. agri from China, Haiti, Indonesia, Iran, Niger and the USA, T. agri syn. n. is proposed as a junior synonym of T. crassicaudatus. |
format | Online Article Text |
id | pubmed-7366841 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Exeley Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-73668412020-07-20 Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania Singh, Phougeishangbam Rolish Kashando, Beatrice E. Couvreur, Marjolein Karssen, Gerrit Bert, Wim J Nematol Arts & Humanities Morphological and molecular analyses of plant-parasitic nematodes (PPN) from 12 sugarcane plantation sites of Tanganyika Planting Company (TPC) Limited in Kilimanjaro region of Tanzania revealed the presence of six PPN genera, i.e. Helicotylenchus, Hemicycliophora, Pratylenchus, Rotylenchulus, Scutellonema, and Tylenchorhynchus. The genera with the highest densities and present in virtually all samples were Pratylenchus and Rotylenchulus, and the most important species appeared to be R. parvus, P. zeae, T. crassicaudatus, and T. ventrosignatus. A total sequences of 11 partial ITS, 15 D2-D3 of 28S, and 6 partial 18S of rRNA gene, and 7 partial COI gene of mtDNA of these species were obtained in this study. Morphology and molecular data comparisons between the Tanzanian R. parvus and the South African R. parvus indicated that R. parvus is a cryptic species complex. Based on the results of morphological and molecular analyses of T. crassicaudatus and T. agri from China, Haiti, Indonesia, Iran, Niger and the USA, T. agri syn. n. is proposed as a junior synonym of T. crassicaudatus. Exeley Inc. 2020-07-06 /pmc/articles/PMC7366841/ /pubmed/32628825 http://dx.doi.org/10.21307/jofnem-2020-059 Text en © 2020 Authors https://creativecommons.org/licenses/by/4.0/ https://creativecommons.org/licenses/by/4.0/This is an Open Access article licensed under the Creative Commons CC BY 4.0 license, https://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Arts & Humanities Singh, Phougeishangbam Rolish Kashando, Beatrice E. Couvreur, Marjolein Karssen, Gerrit Bert, Wim Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania |
title | Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania |
title_full | Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania |
title_fullStr | Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania |
title_full_unstemmed | Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania |
title_short | Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania |
title_sort | plant-parasitic nematodes associated with sugarcane in kilimanjaro, tanzania |
topic | Arts & Humanities |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7366841/ https://www.ncbi.nlm.nih.gov/pubmed/32628825 http://dx.doi.org/10.21307/jofnem-2020-059 |
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