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Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania

Morphological and molecular analyses of plant-parasitic nematodes (PPN) from 12 sugarcane plantation sites of Tanganyika Planting Company (TPC) Limited in Kilimanjaro region of Tanzania revealed the presence of six PPN genera, i.e. Helicotylenchus, Hemicycliophora, Pratylenchus, Rotylenchulus, Scute...

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Autores principales: Singh, Phougeishangbam Rolish, Kashando, Beatrice E., Couvreur, Marjolein, Karssen, Gerrit, Bert, Wim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Exeley Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7366841/
https://www.ncbi.nlm.nih.gov/pubmed/32628825
http://dx.doi.org/10.21307/jofnem-2020-059
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author Singh, Phougeishangbam Rolish
Kashando, Beatrice E.
Couvreur, Marjolein
Karssen, Gerrit
Bert, Wim
author_facet Singh, Phougeishangbam Rolish
Kashando, Beatrice E.
Couvreur, Marjolein
Karssen, Gerrit
Bert, Wim
author_sort Singh, Phougeishangbam Rolish
collection PubMed
description Morphological and molecular analyses of plant-parasitic nematodes (PPN) from 12 sugarcane plantation sites of Tanganyika Planting Company (TPC) Limited in Kilimanjaro region of Tanzania revealed the presence of six PPN genera, i.e. Helicotylenchus, Hemicycliophora, Pratylenchus, Rotylenchulus, Scutellonema, and Tylenchorhynchus. The genera with the highest densities and present in virtually all samples were Pratylenchus and Rotylenchulus, and the most important species appeared to be R. parvus, P. zeae, T. crassicaudatus, and T. ventrosignatus. A total sequences of 11 partial ITS, 15 D2-D3 of 28S, and 6 partial 18S of rRNA gene, and 7 partial COI gene of mtDNA of these species were obtained in this study. Morphology and molecular data comparisons between the Tanzanian R. parvus and the South African R. parvus indicated that R. parvus is a cryptic species complex. Based on the results of morphological and molecular analyses of T. crassicaudatus and T. agri from China, Haiti, Indonesia, Iran, Niger and the USA, T. agri syn. n. is proposed as a junior synonym of T. crassicaudatus.
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spelling pubmed-73668412020-07-20 Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania Singh, Phougeishangbam Rolish Kashando, Beatrice E. Couvreur, Marjolein Karssen, Gerrit Bert, Wim J Nematol Arts & Humanities Morphological and molecular analyses of plant-parasitic nematodes (PPN) from 12 sugarcane plantation sites of Tanganyika Planting Company (TPC) Limited in Kilimanjaro region of Tanzania revealed the presence of six PPN genera, i.e. Helicotylenchus, Hemicycliophora, Pratylenchus, Rotylenchulus, Scutellonema, and Tylenchorhynchus. The genera with the highest densities and present in virtually all samples were Pratylenchus and Rotylenchulus, and the most important species appeared to be R. parvus, P. zeae, T. crassicaudatus, and T. ventrosignatus. A total sequences of 11 partial ITS, 15 D2-D3 of 28S, and 6 partial 18S of rRNA gene, and 7 partial COI gene of mtDNA of these species were obtained in this study. Morphology and molecular data comparisons between the Tanzanian R. parvus and the South African R. parvus indicated that R. parvus is a cryptic species complex. Based on the results of morphological and molecular analyses of T. crassicaudatus and T. agri from China, Haiti, Indonesia, Iran, Niger and the USA, T. agri syn. n. is proposed as a junior synonym of T. crassicaudatus. Exeley Inc. 2020-07-06 /pmc/articles/PMC7366841/ /pubmed/32628825 http://dx.doi.org/10.21307/jofnem-2020-059 Text en © 2020 Authors https://creativecommons.org/licenses/by/4.0/ https://creativecommons.org/licenses/by/4.0/This is an Open Access article licensed under the Creative Commons CC BY 4.0 license, https://creativecommons.org/licenses/by/4.0/
spellingShingle Arts & Humanities
Singh, Phougeishangbam Rolish
Kashando, Beatrice E.
Couvreur, Marjolein
Karssen, Gerrit
Bert, Wim
Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania
title Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania
title_full Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania
title_fullStr Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania
title_full_unstemmed Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania
title_short Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania
title_sort plant-parasitic nematodes associated with sugarcane in kilimanjaro, tanzania
topic Arts & Humanities
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7366841/
https://www.ncbi.nlm.nih.gov/pubmed/32628825
http://dx.doi.org/10.21307/jofnem-2020-059
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