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Information differences across spatial resolutions and scales for disease surveillance and analysis: The case of Visceral Leishmaniasis in Brazil
Nationwide disease surveillance at a high spatial resolution is desired for many infectious diseases, including Visceral Leishmaniasis. Statistical and mathematical models using data collected from surveillance activities often use a spatial resolution and scale either constrained by data availabili...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7367469/ https://www.ncbi.nlm.nih.gov/pubmed/32678864 http://dx.doi.org/10.1371/journal.pone.0235920 |
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author | Servadio, Joseph L. Machado, Gustavo Alvarez, Julio de Ferreira Lima Júnior, Francisco Edilson Vieira Alves, Renato Convertino, Matteo |
author_facet | Servadio, Joseph L. Machado, Gustavo Alvarez, Julio de Ferreira Lima Júnior, Francisco Edilson Vieira Alves, Renato Convertino, Matteo |
author_sort | Servadio, Joseph L. |
collection | PubMed |
description | Nationwide disease surveillance at a high spatial resolution is desired for many infectious diseases, including Visceral Leishmaniasis. Statistical and mathematical models using data collected from surveillance activities often use a spatial resolution and scale either constrained by data availability or chosen arbitrarily. Sensitivity of model results to the choice of spatial resolution and scale is not, however, frequently evaluated. This study aims to determine if the choice of spatial resolution and scale are likely to impact statistical and mathematical analyses. Visceral Leishmaniasis in Brazil is used as a case study. Probabilistic characteristics of disease incidence, representing a likely outcome in a model, are compared across spatial resolutions and scales. Best fitting distributions were fit to annual incidence from 2004 to 2014 by municipality and by state. Best fits were defined as the distribution family and parameterization minimizing the sum of absolute error, evaluated through a simulated annealing algorithm. Gamma and Poisson distributions provided best fits for incidence, both among individual states and nationwide. Comparisons of distributions using Kullback-Leibler divergence shows that incidence by state and by municipality do not follow distributions that provide equivalent information. Few states with Gamma distributed incidence follow a distribution closely resembling that for national incidence. These results demonstrate empirically how choice of spatial resolution and scale can impact mathematical and statistical models. |
format | Online Article Text |
id | pubmed-7367469 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-73674692020-08-05 Information differences across spatial resolutions and scales for disease surveillance and analysis: The case of Visceral Leishmaniasis in Brazil Servadio, Joseph L. Machado, Gustavo Alvarez, Julio de Ferreira Lima Júnior, Francisco Edilson Vieira Alves, Renato Convertino, Matteo PLoS One Research Article Nationwide disease surveillance at a high spatial resolution is desired for many infectious diseases, including Visceral Leishmaniasis. Statistical and mathematical models using data collected from surveillance activities often use a spatial resolution and scale either constrained by data availability or chosen arbitrarily. Sensitivity of model results to the choice of spatial resolution and scale is not, however, frequently evaluated. This study aims to determine if the choice of spatial resolution and scale are likely to impact statistical and mathematical analyses. Visceral Leishmaniasis in Brazil is used as a case study. Probabilistic characteristics of disease incidence, representing a likely outcome in a model, are compared across spatial resolutions and scales. Best fitting distributions were fit to annual incidence from 2004 to 2014 by municipality and by state. Best fits were defined as the distribution family and parameterization minimizing the sum of absolute error, evaluated through a simulated annealing algorithm. Gamma and Poisson distributions provided best fits for incidence, both among individual states and nationwide. Comparisons of distributions using Kullback-Leibler divergence shows that incidence by state and by municipality do not follow distributions that provide equivalent information. Few states with Gamma distributed incidence follow a distribution closely resembling that for national incidence. These results demonstrate empirically how choice of spatial resolution and scale can impact mathematical and statistical models. Public Library of Science 2020-07-17 /pmc/articles/PMC7367469/ /pubmed/32678864 http://dx.doi.org/10.1371/journal.pone.0235920 Text en © 2020 Servadio et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Servadio, Joseph L. Machado, Gustavo Alvarez, Julio de Ferreira Lima Júnior, Francisco Edilson Vieira Alves, Renato Convertino, Matteo Information differences across spatial resolutions and scales for disease surveillance and analysis: The case of Visceral Leishmaniasis in Brazil |
title | Information differences across spatial resolutions and scales for disease surveillance and analysis: The case of Visceral Leishmaniasis in Brazil |
title_full | Information differences across spatial resolutions and scales for disease surveillance and analysis: The case of Visceral Leishmaniasis in Brazil |
title_fullStr | Information differences across spatial resolutions and scales for disease surveillance and analysis: The case of Visceral Leishmaniasis in Brazil |
title_full_unstemmed | Information differences across spatial resolutions and scales for disease surveillance and analysis: The case of Visceral Leishmaniasis in Brazil |
title_short | Information differences across spatial resolutions and scales for disease surveillance and analysis: The case of Visceral Leishmaniasis in Brazil |
title_sort | information differences across spatial resolutions and scales for disease surveillance and analysis: the case of visceral leishmaniasis in brazil |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7367469/ https://www.ncbi.nlm.nih.gov/pubmed/32678864 http://dx.doi.org/10.1371/journal.pone.0235920 |
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